RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 UBXN8O00124 270 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 KIAA0513O60268 411 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 RAMP1O60894 148 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 GCM2O75603 506 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-206ENST00000426196 TSC22D1Q15714 1073 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 ERCC6LQ2NKX8 1250 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 SFRP5Q5T4F7 317 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 LGSNQ5TDP6 509 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 GTF2IRD2BQ6EKJ0 949 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 GTF2IRD2Q86UP8 949 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 CCDC25Q86WR0 208 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 ANKMY2Q8IV38 441 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 UHMK1Q8TAS1 419 aaKnown RBP12.62□□□□□ -0.39
HDAC6-206ENST00000426196 WDR20Q8TBZ3 569 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 MS4A14Q96JA4 679 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 UBXN10Q96LJ8 280 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 MCMBPQ9BTE3 642 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 L2HGDHQ9H9P8 463 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 SAYSD1Q9NPB0 183 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 TXNDC16Q9P2K2 825 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 ABCG2Q9UNQ0 655 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 OR10H1Q9Y4A9 318 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 ZNF780BQ9Y6R6 833 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 SLC35F4A4IF30 521 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 SHISA9B4DS77 424 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 PGRMC1O00264 195 aaKnown RBP12.61□□□□□ -0.39
HDAC6-206ENST00000426196 KERAO60938 352 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 PTNP21246 168 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 CLK3P49761 638 aaKnown RBP12.61□□□□□ -0.39
HDAC6-206ENST00000426196 IRF9Q00978 393 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 DUSP2Q05923 314 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 MORF4L2Q15014 288 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 NPSR1Q6W5P4 371 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 WDR75Q8IWA0 830 aaKnown RBP12.61□□□□□ -0.39
HDAC6-206ENST00000426196 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-206ENST00000426196 GABRG1Q8N1C3 465 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 BANPQ8N9N5 519 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 ZNF675Q8TD23 568 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 C10orf105Q8TEF2 133 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 ERP27Q96DN0 273 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 VSTM2LQ96N03 204 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 EML4Q9HC35 981 aaKnown RBP12.61□□□□□ -0.39
HDAC6-206ENST00000426196 PFDN4Q9NQP4 134 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 CBLN4Q9NTU7 201 aa12.61□□□□□ -0.39
HDAC6-206ENST00000426196 CXCL13O43927 109 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 ZNF17P17021 662 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 ARL1P40616 181 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-206ENST00000426196 PIK3CGP48736 1102 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 ARL4CP56559 192 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 RAB10P61026 200 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 TMEM201Q5SNT2 666 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 C11orf71Q6IPW1 123 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 MFSD12Q6NUT3 480 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 TFAP2EQ6VUC0 442 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 GALNT10Q86SR1 603 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 ISCA2Q86U28 154 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 SGMS2Q8NHU3 365 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 TRPC4APQ8TEL6 797 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 DUSP19Q8WTR2 217 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 HTRA1Q92743 480 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 CNRIP1Q96F85 164 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-206ENST00000426196 PBKQ96KB5 322 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 ATOH8Q96SQ7 321 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 GPR22Q99680 433 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 MRPL1Q9BYD6 325 aaKnown RBP12.6□□□□□ -0.39
HDAC6-206ENST00000426196 ANKRA2Q9H9E1 313 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 NMRAL1Q9HBL8 299 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 RNF11Q9Y3C5 154 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 PKD1L1Q8TDX9 2849 aa12.6□□□□□ -0.39
HDAC6-206ENST00000426196 ARFGEF3Q5TH69 2177 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 SYCE1LA8MT33 242 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 SHISA8B8ZZ34 492 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 ABCD4O14678 606 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 FADS1O60427 444 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 PABPC4LP0CB38 370 aaKnown RBP12.59□□□□□ -0.39
HDAC6-206ENST00000426196 ITGA2P17301 1181 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 TTKP33981 857 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 ALDH9A1P49189 494 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 ITGADQ13349 1161 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 GTF2H2Q13888 395 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 GGTLC2Q14390 218 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 P2RY6Q15077 328 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 ZKSCAN8Q15776 578 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-206ENST00000426196 STK11Q15831 433 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 ZNF628Q5EBL2 1059 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 PDSS1Q5T2R2 415 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 FAM180BQ6P0A1 224 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 GTF2H2CQ6P1K8 395 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 SEZ6L2Q6UXD5 910 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 FBXL14Q8N1E6 418 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 L3MBTL4Q8NA19 623 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 FBXO36Q8NEA4 188 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 OR2V1Q8NHB1 315 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 MUCL1Q96DR8 90 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 C1orf159Q96HA4 380 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 REXO5Q96IC2 774 aaKnown RBP12.59□□□□□ -0.39
HDAC6-206ENST00000426196 RADILQ96JH8 1075 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 FAIM2Q9BWQ8 316 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 FAM120CQ9NX05 1096 aaKnown RBP12.59□□□□□ -0.39
HDAC6-206ENST00000426196 POU2F3Q9UKI9 436 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms