RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 PGM3O95394 542 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 AGR2O95994 175 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 IFNA16P05015 189 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 IFI6P09912 130 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 LINGO3P0C6S8 592 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 SMIM18P0DKX4 95 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 COX6A1P12074 109 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 IST1P53990 364 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 TP53BP2Q13625 1128 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 APOFQ13790 326 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 IQCCQ4KMZ1 466 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 TNFAIP8L2Q6P589 184 aaPredicted RBP14.5□□□□□ -0.09
SHOX2-202ENST00000425436 THAP5Q7Z6K1 395 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 CCDC116Q8IYX3 515 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 OR10Q1Q8NGQ4 319 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 DOK4Q8TEW6 326 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 SNRNP27Q8WVK2 155 aaKnown RBP14.5□□□□□ -0.09
SHOX2-202ENST00000425436 NACC2Q96BF6 587 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 CNRIP1Q96F85 164 aaPredicted RBP14.5□□□□□ -0.09
SHOX2-202ENST00000425436 ZNF681Q96N22 645 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 WDR77Q9BQA1 342 aaPredicted RBP14.5□□□□□ -0.09
SHOX2-202ENST00000425436 BCL2L10Q9HD36 194 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 CALML5Q9NZT1 146 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 NDUFAF4Q9P032 175 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 C19orf25Q9UFG5 118 aaPredicted RBP14.5□□□□□ -0.09
SHOX2-202ENST00000425436 LIPT1Q9Y234 373 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 HSPE1-MOB4S4R3N1 261 aa14.5□□□□□ -0.09
SHOX2-202ENST00000425436 BLACEA4D250 179 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 TRIM64A6NGJ6 449 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 DUXAA6NLW8 204 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 TMEM229AB2RXF0 380 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 PLOD2O00469 737 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 DNAJB5O75953 348 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 GPR75O95800 540 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 CYC1P08574 325 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 GNAO1P09471 354 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 ITGAMP11215 1152 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 RHCEP18577 417 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 IGFBP5P24593 272 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 CRISP3P54108 245 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 CASP9P55211 416 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 TPD52P55327 224 aaPredicted RBP14.49□□□□□ -0.09
SHOX2-202ENST00000425436 TOP3AQ13472 1001 aaPredicted RBP14.49□□□□□ -0.09
SHOX2-202ENST00000425436 PCOLCEQ15113 449 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 DCAF10Q5QP82 559 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 KDM4DQ6B0I6 523 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 NDUFAF7Q7L592 441 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 TMEM179BQ7Z7N9 219 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 GALNT10Q86SR1 603 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 LRRC25Q8N386 305 aaPredicted RBP14.49□□□□□ -0.09
SHOX2-202ENST00000425436 ZNF786Q8N393 782 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 SETD9Q8NE22 299 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 PIK3C3Q8NEB9 887 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 BBS10Q8TAM1 723 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 SUN3Q8TAQ9 357 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 PROX1Q92786 737 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 EXTL1Q92935 676 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 TMEM19Q96HH6 336 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 IP6K3Q96PC2 410 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 ZNF300Q96RE9 604 aaPredicted RBP14.49□□□□□ -0.09
SHOX2-202ENST00000425436 BTBD2Q9BX70 525 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 ZNF700Q9H0M5 742 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 ING2Q9H160 280 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 CXorf56Q9H5V9 222 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 EXD2Q9NVH0 621 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 DDX18Q9NVP1 670 aaKnown RBP14.49□□□□□ -0.09
SHOX2-202ENST00000425436 PDP1Q9P0J1 537 aaPredicted RBP14.49□□□□□ -0.09
SHOX2-202ENST00000425436 NTMQ9P121 344 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 PCDHGB5Q9Y5G0 923 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 MAGED1Q9Y5V3 778 aaPredicted RBP14.49□□□□□ -0.09
SHOX2-202ENST00000425436 KCNMB2Q9Y691 235 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 U3KQV3 271 aa14.49□□□□□ -0.09
SHOX2-202ENST00000425436 EPG5Q9HCE0 2579 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 NSG1A0A0A6YYJ2 146 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 LOC100130705A0A1B0GUX0 176 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 A6NL46 340 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 TNFRSF11BO00300 401 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 SLC28A2O43868 658 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 IFNW1P05000 195 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 TFAP2AP05549 437 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 BCHEP06276 602 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 CELA2AP08217 269 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 NR2F1P10589 423 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 ANXA8P13928 327 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 ETS2P15036 469 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 TNNI3P19429 210 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 RYKP34925 604 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 FEN1P39748 380 aaKnown RBP14.48□□□□□ -0.09
SHOX2-202ENST00000425436 XKP51811 444 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 HMGA2P52926 109 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 SMIM11AP58511 58 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 Q0VFX4 171 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 TBR1Q16650 682 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 ZIK1Q3SY52 487 aaPredicted RBP14.48□□□□□ -0.09
SHOX2-202ENST00000425436 RBM48Q5RL73 367 aaKnown RBP14.48□□□□□ -0.09
SHOX2-202ENST00000425436 PAPD4Q6PIY7 484 aaKnown RBP14.48□□□□□ -0.09
SHOX2-202ENST00000425436 DGAT2L6Q6ZPD8 337 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 ELP4Q96EB1 424 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 FBXL20Q96IG2 436 aa14.48□□□□□ -0.09
SHOX2-202ENST00000425436 MUS81Q96NY9 551 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms