RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CD8AP01732 235 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 EIF1AXP47813 144 aaKnown RBP14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 PSG6Q00889 435 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 IRF9Q00978 393 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 ERCC6LQ2NKX8 1250 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 GGTA1PQ4G0N0 100 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 OR10H5Q8NGA6 315 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 KAT2AQ92830 837 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 S100PBPQ96BU1 408 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 ADGRG7Q96K78 797 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 GPR78Q96P69 363 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 TRAF4Q9BUZ4 470 aaPredicted RBP14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 C19orf24Q9BVV8 132 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 BEX2Q9BXY8 128 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 AMBRA1Q9C0C7 1298 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 NGBQ9NPG2 151 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 TAS2R9Q9NYW1 312 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 GDF2Q9UK05 429 aaPredicted RBP14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 SLC12A4Q9UP95 1085 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 SNX24Q9Y343 169 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 SNX8Q9Y5X2 465 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 IGLV3-32A0A0A0MS00 114 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 HAX1O00165 279 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 EIF1AYO14602 144 aaKnown RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 GCM2O75603 506 aaPredicted RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 C2P06681 752 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 FESP07332 822 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 TCP1P17987 556 aaKnown RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 ADH6P28332 368 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 ALDH9A1P49189 494 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 TRAF3Q13114 568 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 TMEM249Q2WGJ8 235 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 CYP27C1Q4G0S4 372 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 MFSD12Q6NUT3 480 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 DTX2Q86UW9 622 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 SAMD14Q8IZD0 417 aaPredicted RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 PPM1NQ8N819 430 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 OR9A2Q8NGT5 310 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 OR10D3Q8NH80 312 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 HSD17B8Q92506 261 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 HS6ST2Q96MM7 605 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 TNFRSF13CQ96RJ3 184 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 ELOVL6Q9H5J4 265 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 BRF2Q9HAW0 419 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 FLRT3Q9NZU0 649 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 LPAR3Q9UBY5 353 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 MCTS1Q9ULC4 181 aaKnown RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 OR10H1Q9Y4A9 318 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.92□□□□□ -0.025e-6■■■■□ 22.8
CHCHD3-202ENST00000423635 IGHV4-30-2A0A087WSY4 118 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 ADAMDEC1O15204 470 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 KLHL2O95198 593 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 ARL1P40616 181 aaPredicted RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 VLDLRP98155 873 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 LOXL1Q08397 574 aaPredicted RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 STX5Q13190 355 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 TAB1Q15750 504 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 NRF1Q16656 503 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 GABRG1Q8N1C3 465 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 MTBPQ96DY7 904 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 KCNK17Q96T54 332 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 USB1Q9BQ65 265 aaKnown RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 TRIM2Q9C040 744 aa14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 FARSBQ9NSD9 589 aaKnown RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 FAM120CQ9NX05 1096 aaKnown RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 CPSF2Q9P2I0 782 aaKnown RBP14.92□□□□□ -0.02
CHCHD3-202ENST00000423635 YLPM1P49750 1951 aaKnown RBP14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 ALPK2Q86TB3 2170 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 SSX4O60224 188 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 PDYNP01213 254 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 ZNF17P17021 662 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 AGTR1P30556 359 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 CLK3P49761 638 aaKnown RBP14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 C17orf67Q0P5P2 114 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 FAPQ12884 760 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 SGO1Q5FBB7 561 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 SFRP5Q5T4F7 317 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 GTF2IRD2BQ6EKJ0 949 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 ALKBH2Q6NS38 261 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 PPP4R4Q6NUP7 873 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 FIGNL1Q6PIW4 674 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 MARCH3Q86UD3 253 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 GTF2IRD2Q86UP8 949 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 CREG2Q8IUH2 290 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 WDR75Q8IWA0 830 aaKnown RBP14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 OR7G2Q8NG99 324 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 OR4F6Q8NGB9 312 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 PIWIL2Q8TC59 973 aaKnown RBP14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 HBEGFQ99075 208 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 ALG2Q9H553 416 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 PFDN4Q9NQP4 134 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 FBXO34Q9NWN3 711 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 NMRK1Q9NWW6 199 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 PCTPQ9UKL6 214 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 B3GALT5Q9Y2C3 310 aa14.91□□□□□ -0.02
CHCHD3-202ENST00000423635 CADP27708 2225 aa14.9□□□□□ -0.02
CHCHD3-202ENST00000423635 DPRXA6NFQ7 191 aa14.9□□□□□ -0.02
CHCHD3-202ENST00000423635 ELOA3DA6NLF2 546 aaPredicted RBP14.9□□□□□ -0.02
CHCHD3-202ENST00000423635 SHISA8B8ZZ34 492 aa14.9□□□□□ -0.02
CHCHD3-202ENST00000423635 SYNGR4O95473 234 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms