RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 CYP27C1Q4G0S4 372 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 DESI1Q6ICB0 168 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 SATL1Q86VE3 508 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 METTL25Q8N6Q8 603 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 NKD1Q969G9 470 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 TPD52L3Q96J77 140 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 TREX2Q9BQ50 279 aaPredicted RBP8.3□□□□□ -1.08
HPS4-204ENST00000422379 WFDC6Q9BQY6 131 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 GRIP2Q9C0E4 1043 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 SLC38A1Q9H2H9 487 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 TOR3AQ9H497 397 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 OCEL1Q9H607 264 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 CLCA3PQ9Y6N3 262 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 APC2O95996 2303 aa8.3□□□□□ -1.08
HPS4-204ENST00000422379 SAGE2PA6NJ88 616 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 A8MVJ9 347 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 H0YAE9 185 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 BRINP1O60477 761 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 SLITRK5O94991 958 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 NKX2-2O95096 273 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 EPPINO95925 133 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 PABPC4LP0CB38 370 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 COX6A1P12074 109 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 WT1P19544 449 aaPredicted RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 TNFRSF1BP20333 461 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 PRKACGP22612 351 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 GABRA3P34903 492 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 RPL5P46777 297 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 PRIM2P49643 509 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 RNF144AP50876 292 aaPredicted RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 PLAURQ03405 335 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 CHRNEQ04844 493 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 RBBP4Q09028 425 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 EBPQ15125 230 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 IQCCQ4KMZ1 466 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 TMEM164Q5U3C3 297 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 OR2T5Q6IEZ7 315 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 TTC33Q6PID6 262 aaPredicted RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 PAPD4Q6PIY7 484 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 CPEB2Q7Z5Q1 589 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 PATL1Q86TB9 770 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 NLGN4XQ8N0W4 816 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 ZNF786Q8N393 782 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 GALNT15Q8N3T1 639 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 NLGN4YQ8NFZ3 816 aaPredicted RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 TSPAN14Q8NG11 270 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 OR11G2Q8NGC1 345 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 OR1N1Q8NGS0 311 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 OR2T29Q8NH02 315 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 ADIPOR1Q96A54 375 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 FAM122AQ96E09 287 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 C7orf34Q96L11 122 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 RDH12Q96NR8 316 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 MBOAT4Q96T53 435 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 BARD1Q99728 777 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 RBM4BQ9BQ04 359 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 PELOQ9BRX2 385 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 LMF2Q9BU23 707 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 RBM4Q9BWF3 364 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 YIPF3Q9GZM5 350 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 NXF5Q9H1B4 397 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 PIGUQ9H490 435 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 ADPRHL2Q9NX46 363 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 GPN3Q9UHW5 284 aaPredicted RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 KCNE5Q9UJ90 142 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 NXT1Q9UKK6 140 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 PPIEQ9UNP9 301 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 CHST2Q9Y4C5 530 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 IGHV1-45A0A0A0MS14 117 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 CDC14CA4D256 554 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 STMND1H3BQB6 276 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 SUV39H1O43463 412 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 ASNA1O43681 348 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 SLC28A2O43868 658 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 HS6ST1O60243 411 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 PRAMEF2O60811 474 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 OR6B1O95007 311 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 RAB40ALP0C0E4 278 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 SDHBP21912 280 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 FUT4P22083 530 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 DLSTP36957 453 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 PLA2G5P39877 138 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 ST13P50502 369 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 CDH15P55291 814 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 KCNJ10P78508 379 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 Q0VFX4 171 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 DNASE1L3Q13609 305 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 LAPTM4AQ15012 233 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 MAPK14Q16539 360 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 ZNF630Q2M218 657 aaPredicted RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 KCTD21Q4G0X4 260 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 SHQ1Q6PI26 577 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 BHLHB9Q6PI77 547 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 FIGNL1Q6PIW4 674 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 FRRS1Q6ZNA5 592 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 CCDC80Q76M96 950 aa8.29□□□□□ -1.08
HPS4-204ENST00000422379 TSEN54Q7Z6J9 526 aaKnown RBP8.29□□□□□ -1.08
HPS4-204ENST00000422379 HIPK1Q86Z02 1210 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms