RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 FOXF2Q12947 444 aa23.1■■□□□ 1.29
SMDT1-202ENST00000422252 STX5Q13190 355 aa23.1■■□□□ 1.29
SMDT1-202ENST00000422252 GANABQ14697 944 aaKnown RBP23.1■■□□□ 1.29
SMDT1-202ENST00000422252 EMBQ6PCB8 327 aa23.1■■□□□ 1.29
SMDT1-202ENST00000422252 FAM222BQ8WU58 562 aa23.1■■□□□ 1.29
SMDT1-202ENST00000422252 SFXN3Q9BWM7 321 aa23.1■■□□□ 1.29
SMDT1-202ENST00000422252 ACSS1Q9NUB1 689 aaPredicted RBP23.1■■□□□ 1.29
SMDT1-202ENST00000422252 MED11Q9P086 117 aa23.1■■□□□ 1.29
SMDT1-202ENST00000422252 GXYLT2A0PJZ3 443 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 HK1P19367 917 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 BCL2A1Q16548 175 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 VPS26BQ4G0F5 336 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 PLXDC2Q6UX71 529 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 ZCCHC23Q6ZST2 131 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 MARCH3Q86UD3 253 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 KIF18BQ86Y91 864 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 CEP70Q8NHQ1 597 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 GPR151Q8TDV0 419 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 PIK3R3Q92569 461 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 HOXB13Q92826 284 aaPredicted RBP23.09■■□□□ 1.29
SMDT1-202ENST00000422252 MTERF3Q96E29 417 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 POLDIP3Q9BY77 421 aaKnown RBP23.09■■□□□ 1.29
SMDT1-202ENST00000422252 RTN4RQ9BZR6 473 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 ACBD3Q9H3P7 528 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 PTGES2Q9H7Z7 377 aa23.09■■□□□ 1.29
SMDT1-202ENST00000422252 CELSR1Q9NYQ6 3014 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 UTS2O95399 124 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 BCKDHAP12694 445 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 PEPDP12955 493 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 MAP3K8P41279 467 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 PRKAG1P54619 331 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 RAET1LQ5VY80 246 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 SPNS3Q6ZMD2 512 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 R3HCC1LQ7Z5L2 792 aaKnown RBP23.08■■□□□ 1.29
SMDT1-202ENST00000422252 GRAMD2AQ8IUY3 354 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 CDRT4Q8N9R6 151 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 NUP43Q8NFH3 380 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 AGR3Q8TD06 166 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 DUSP19Q8WTR2 217 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 NRGNQ92686 78 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 INTS12Q96CB8 462 aaKnown RBP23.08■■□□□ 1.29
SMDT1-202ENST00000422252 RMND5BQ96G75 393 aaPredicted RBP23.08■■□□□ 1.29
SMDT1-202ENST00000422252 PPP3R2Q96LZ3 170 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 GPATCH1Q9BRR8 931 aaKnown RBP23.08■■□□□ 1.29
SMDT1-202ENST00000422252 TBL1XR1Q9BZK7 514 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 NTMQ9P121 344 aa23.08■■□□□ 1.29
SMDT1-202ENST00000422252 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 FAM221AA4D161 298 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 TUBAL3A6NHL2 446 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 TMEM114B3SHH9 223 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 HCRTR2O43614 444 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 NKX2-2O95096 273 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 IGKV1D-16P01601 117 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 MAPK1P28482 360 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 DNAJA1P31689 397 aaKnown RBP23.07■■□□□ 1.28
SMDT1-202ENST00000422252 SERPINB5P36952 375 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 SORDQ00796 357 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 WDR93Q6P2C0 686 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 SZRD1Q7Z422 152 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 CAVIN3Q969G5 261 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 GIMAP5Q96F15 307 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 MS4A4EQ96PG1 132 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 RASSF1Q9NS23 344 aa23.07■■□□□ 1.28
SMDT1-202ENST00000422252 ANKHD1Q8IWZ3 2542 aaKnown RBP23.07■■□□□ 1.28
SMDT1-202ENST00000422252 A6NNC1 897 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 DDX5P17844 614 aaKnown RBP23.06■■□□□ 1.28
SMDT1-202ENST00000422252 PRR5P85299 388 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 C17orf67Q0P5P2 114 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 GRAMD1BQ3KR37 738 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 XKR7Q5GH72 579 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 LRIG3Q6UXM1 1119 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 EXOC3L1Q86VI1 746 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 GCNT2Q8N0V5 402 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 SLC9A6Q92581 669 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 C1GALT1C1Q96EU7 318 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 CLEC4MQ9H2X3 399 aaPredicted RBP23.06■■□□□ 1.28
SMDT1-202ENST00000422252 GIMAP2Q9UG22 337 aa23.06■■□□□ 1.28
SMDT1-202ENST00000422252 TEP1Q99973 2627 aaKnown RBP23.05■■□□□ 1.28
SMDT1-202ENST00000422252 LINC01387J3KSC0 135 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 SCAMP2O15127 329 aaKnown RBP23.05■■□□□ 1.28
SMDT1-202ENST00000422252 EMC8O43402 210 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 PEX11AO75192 247 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 ANGPTL1O95841 491 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 CREB1P16220 341 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 ARRB2P32121 409 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 HPCAL1P37235 193 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 EEF1A1P68104 462 aaKnown RBP23.05■■□□□ 1.28
SMDT1-202ENST00000422252 EEF1A1P5Q5VTE0 462 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 APOOLQ6UXV4 268 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 CHMP1BQ7LBR1 199 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 UBQLNLQ8IYU4 475 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 MEIOBQ8N635 442 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 GOT1L1Q8NHS2 421 aaPredicted RBP23.05■■□□□ 1.28
SMDT1-202ENST00000422252 FBXO30Q8TB52 745 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 RBM24Q9BX46 236 aaKnown RBP23.05■■□□□ 1.28
SMDT1-202ENST00000422252 PIGMQ9H3S5 423 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 ATP6V1HQ9UI12 483 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 ZNF337Q9Y3M9 751 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 SPG11Q96JI7 2443 aa23.05■■□□□ 1.28
SMDT1-202ENST00000422252 F8P00451 2351 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms