RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 RAB35Q15286 201 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 QRICH1Q2TAL8 776 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 ZNF699Q32M78 642 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 ZNF528Q3MIS6 628 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 ACSF3Q4G176 576 aaPredicted RBP2.6□□□□□ -1.99
LINC00397-201ENST00000422074 ISLR2Q6UXK2 745 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 ADAMTSL5Q6ZMM2 481 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 Q7L0L9 218 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 PRSS48Q7RTY5 328 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 ZSCAN30Q86W11 494 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 CNNM3Q8NE01 707 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 OR56B1Q8NGI3 324 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 DNAJA3Q96EY1 480 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 TECTBQ96PL2 329 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 WRAP53Q9BUR4 548 aaKnown RBP2.6□□□□□ -1.99
LINC00397-201ENST00000422074 HSD3B7Q9H2F3 369 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 ROPN1Q9HAT0 212 aaPredicted RBP2.6□□□□□ -1.99
LINC00397-201ENST00000422074 VAT1LQ9HCJ6 419 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 MYOZ2Q9NPC6 264 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 YAE1D1Q9NRH1 226 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 DCAF13Q9NV06 445 aaKnown RBP2.6□□□□□ -1.99
LINC00397-201ENST00000422074 P2RX2Q9UBL9 471 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 RNF115Q9Y4L5 304 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 CLCA3PQ9Y6N3 262 aa2.6□□□□□ -1.99
LINC00397-201ENST00000422074 IGLV8-61A0A075B6I0 122 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 TRBV7-9A0A0J9YWB2 115 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 FAM230AA0A1W2PPH8 454 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 ANKRD30BLA7E2S9 258 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 E9PMD0 336 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 G3V3Y1 287 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 SGK494L7N484 410 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 SLC17A2O00624 439 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 CASKO14936 926 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 ADAM12O43184 909 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 TOM1L1O75674 476 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 SERF1AO75920 110 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 PTBP3O95758 552 aaKnown RBP2.59□□□□□ -1.99
LINC00397-201ENST00000422074 IGLV1-47P01700 117 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 ANXA4P09525 319 aaPredicted RBP2.59□□□□□ -1.99
LINC00397-201ENST00000422074 CT45A10P0DMU9 189 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 CD1EP15812 388 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 MDKP21741 143 aaPredicted RBP2.59□□□□□ -1.99
LINC00397-201ENST00000422074 ZP3P21754 424 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 XCR1P46094 333 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 OR1D4P47884 311 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 HTR5AP47898 357 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 CD47Q08722 323 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 OVGP1Q12889 678 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 CEBPEQ15744 281 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 ZIC1Q15915 447 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 LRIT3Q3SXY7 679 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 SEL1L2Q5TEA6 688 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 MEDAGQ5VYS4 303 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 SLX4IPQ5VYV7 408 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 LPCAT2Q7L5N7 544 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 NET1Q7Z628 596 aaPredicted RBP2.59□□□□□ -1.99
LINC00397-201ENST00000422074 ZNF677Q86XU0 584 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 CCDC36Q8IYA8 594 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 OR2L5Q8NG80 312 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 CCDC110Q8TBZ0 833 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 RNF138Q8WVD3 245 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 ART4Q93070 314 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 C19orf24Q9BVV8 132 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 KAT8Q9H7Z6 458 aaKnown RBP2.59□□□□□ -1.99
LINC00397-201ENST00000422074 DPM3Q9P2X0 92 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 APOBEC3BQ9UH17 382 aaKnown RBP2.59□□□□□ -1.99
LINC00397-201ENST00000422074 BARX2Q9UMQ3 279 aaPredicted RBP2.59□□□□□ -1.99
LINC00397-201ENST00000422074 MGAT4BQ9UQ53 548 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 CHMP2BQ9UQN3 213 aa2.59□□□□□ -1.99
LINC00397-201ENST00000422074 CUX2O14529 1486 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 BICDL2A1A5D9 508 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 WASH3PC4AMC7 463 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 SCGB2A1O75556 95 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 B3GALNT1O75752 331 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 HSPB1P04792 205 aaKnown RBP2.58□□□□□ -2
LINC00397-201ENST00000422074 IGFBP1P08833 259 aaPredicted RBP2.58□□□□□ -2
LINC00397-201ENST00000422074 H2AFZP0C0S5 128 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 UQCRBP14927 111 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 CPN1P15169 458 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 ZNF32P17041 273 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 PAICSP22234 425 aaKnown RBP2.58□□□□□ -2
LINC00397-201ENST00000422074 IDSP22304 550 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 DNAJB1P25685 340 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 CCND2P30279 289 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 STK19P49842 368 aaPredicted RBP2.58□□□□□ -2
LINC00397-201ENST00000422074 EMDP50402 254 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 P2RY4P51582 365 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 ZNF85Q03923 595 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 ZSWIM7Q19AV6 140 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 HSP90AA5PQ58FG0 334 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 OTPQ5XKR4 325 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 PNCKQ6P2M8 343 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 SCYL2Q6P3W7 929 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 WASH2PQ6VEQ5 465 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 PAQR9Q6ZVX9 377 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 LRRC70Q7Z2Q7 622 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 MISPQ8IVT2 679 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 ARFGAP2Q8N6H7 521 aa2.58□□□□□ -2
LINC00397-201ENST00000422074 DQX1Q8TE96 717 aaKnown RBP2.58□□□□□ -2
LINC00397-201ENST00000422074 SETD7Q8WTS6 366 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms