RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 ZFP36L2P47974 494 aaKnown RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 ATP12AP54707 1039 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 AQP4P55087 323 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PRICKLE4Q2TBC4 344 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ARHGAP11BQ3KRB8 267 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ZNF628Q5EBL2 1059 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 CEP78Q5JTW2 689 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 C8orf82Q6P1X6 216 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 OPN5Q6U736 354 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 B3GNT8Q7Z7M8 397 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ZNF605Q86T29 641 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PTOV1Q86YD1 416 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 CLEC1AQ8NC01 280 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ZNF248Q8NDW4 579 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 B3GNT7Q8NFL0 401 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 C16orf52Q8NHV5 167 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 GRHL3Q8TE85 626 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 GTPBP3Q969Y2 492 aaKnown RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 EFHD2Q96C19 240 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 JSRP1Q96MG2 331 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 ZNF681Q96N22 645 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 RDH12Q96NR8 316 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ZNF559Q9BR84 538 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ITPAQ9BY32 194 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 POLR2J3Q9H1A7 115 aaKnown RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 APMAPQ9HDC9 416 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 SLC52A3Q9NQ40 469 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 NECTIN3Q9NQS3 549 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 SERINC1Q9NRX5 453 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 EXO1Q9UQ84 846 aaKnown RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 POFUT2Q9Y2G5 429 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 MED31Q9Y3C7 131 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 RIF1Q5UIP0 2472 aaKnown RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 OR2W5A6NFC9 320 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 HCRTR1O43613 425 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 SCO2O43819 266 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 TNFAIP8O95379 198 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 TFPTP0C1Z6 253 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PGCP20142 388 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PRKAR1BP31321 381 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 GALNSP34059 522 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 RPL4P36578 427 aaKnown RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 DCTP40126 519 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PCYT1AP49585 367 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 KCNJ10P78508 379 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 NKG7Q16617 165 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ABHD17BQ5VST6 288 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 POMZP3Q6PJE2 187 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PRR22Q8IZ63 422 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 NLGN4XQ8N0W4 816 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 GATSQ8NAP1 163 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PLPP5Q8NEB5 264 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 NLGN4YQ8NFZ3 816 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 ANKRD9Q96BM1 317 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 SH3YL1Q96HL8 342 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 SDF2Q99470 211 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ADI1Q9BV57 179 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PAPOLBQ9NRJ5 636 aaKnown RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 AGPAT4Q9NRZ5 378 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 SIRT3Q9NTG7 399 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 RHCGQ9UBD6 479 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 MGAT4BQ9UQ53 548 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ZNF443Q9Y2A4 671 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 LRRK1Q38SD2 2015 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 C4orf51C9J302 202 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 FAAHO00519 579 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 ACOX3O15254 700 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 TBX6O95947 436 aaPredicted RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 POU2F1P14859 743 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 TNFRSF1BP20333 461 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 KCNJ5P48544 419 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 PDX1P52945 283 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 MPEG1Q2M385 716 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 C1QTNF12Q5T7M4 302 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 TOR1AIP2Q8NFQ8 470 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 PSMA8Q8TAA3 256 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 DIO2Q92813 273 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 TAMM41Q96BW9 452 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 FER1L6-AS2Q96M78 137 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 HS6ST2Q96MM7 605 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 Q96MT0 163 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 EPYCQ99645 322 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 HPF1Q9NWY4 346 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 MYRFQ9Y2G1 1151 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 TPRKBQ9Y3C4 175 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 B3GALT1Q9Y5Z6 326 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 IGHV3-20A0A0C4DH32 117 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 CDC14CA4D256 554 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 M0R3H8 397 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 WWP2O00308 870 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 OXSR1O95747 527 aaPredicted RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 PABPC4LP0CB38 370 aaKnown RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 GIMD1P0DJR0 217 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 CYP4B1P13584 511 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 DLSTP36957 453 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 FRKP42685 505 aaPredicted RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 SLC16A1P53985 500 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 TOP3AQ13472 1001 aaPredicted RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 NCF4Q15080 339 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 PDK3Q15120 406 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms