RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TWIST2Q8WVJ9 160 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 C3orf30Q96M34 536 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 GPATCH1Q9BRR8 931 aaKnown RBP9.99□□□□□ -0.81
SSBP3-206ENST00000420121 LIME1Q9H400 295 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 DSN1Q9H410 356 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 SIRT3Q9NTG7 399 aaPredicted RBP9.99□□□□□ -0.81
SSBP3-206ENST00000420121 FAM120CQ9NX05 1096 aaKnown RBP9.99□□□□□ -0.81
SSBP3-206ENST00000420121 MED11Q9P086 117 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 ABCG2Q9UNQ0 655 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 RPH3AQ9Y2J0 694 aaPredicted RBP9.99□□□□□ -0.81
SSBP3-206ENST00000420121 TRAF6Q9Y4K3 522 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 SETD2Q9BYW2 2564 aaPredicted RBP9.99□□□□□ -0.81
SSBP3-206ENST00000420121 VPS13CQ709C8 3753 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 IGLV3-32A0A0A0MS00 114 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 H0Y3Z8 333 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 H0YC42 278 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 AKAP10O43572 662 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 TYROBPO43914 113 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 RCBTB2O95199 551 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 ZWINTO95229 277 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 TMIGD3P0DMS9 266 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-206ENST00000420121 ACP2P11117 423 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 PRPS2P11908 318 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 TCEA1P23193 301 aaKnown RBP9.98□□□□□ -0.81
SSBP3-206ENST00000420121 DNAJA1P31689 397 aaKnown RBP9.98□□□□□ -0.81
SSBP3-206ENST00000420121 OPRM1P35372 400 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 ETV4P43268 484 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 TPD52P55327 224 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-206ENST00000420121 MRPS22P82650 360 aaKnown RBP9.98□□□□□ -0.81
SSBP3-206ENST00000420121 BCL2A1Q16548 175 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 DECR1Q16698 335 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 TMEM44Q2T9K0 475 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 GALNTL6Q49A17 601 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 ENPP6Q6UWR7 440 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 ZAR1Q86SH2 424 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 MARCH3Q86UD3 253 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 EXOC3L1Q86VI1 746 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 TMEM200AQ86VY9 491 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 ZNF454Q8N9F8 522 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 FAM110BQ8TC76 370 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 NUDT8Q8WV74 236 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 PIK3R3Q92569 461 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 WNT2BQ93097 391 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 SFXN2Q96NB2 322 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 Q9N2J8 555 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 EQTNQ9NQ60 294 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 RASSF1Q9NS23 344 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 ACSS1Q9NUB1 689 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-206ENST00000420121 DNAJB12Q9NXW2 375 aaKnown RBP9.98□□□□□ -0.81
SSBP3-206ENST00000420121 PPP4R1LQ9P1A2 415 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 FOXD3Q9UJU5 478 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-206ENST00000420121 DKKL1Q9UK85 242 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 TMED5Q9Y3A6 229 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 NF1P21359 2839 aa9.98□□□□□ -0.81
SSBP3-206ENST00000420121 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 TTC36A6NLP5 189 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 A6NNC1 897 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 TNFSF13O75888 250 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 UTS2O95399 124 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 EFNA1P20827 205 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-206ENST00000420121 GABRA3P34903 492 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 SUCLG1P53597 346 aaKnown RBP9.97□□□□□ -0.81
SSBP3-206ENST00000420121 PRR5P85299 388 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 STX5Q13190 355 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 DAZAP2Q15038 168 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-206ENST00000420121 GRAMD1BQ3KR37 738 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 WDR93Q6P2C0 686 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 AAGABQ6PD74 315 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 GCNT2Q8N0V5 402 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 SLC16A11Q8NCK7 471 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 NUP43Q8NFH3 380 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 OR4K17Q8NGC6 315 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 DUSP19Q8WTR2 217 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 FAM222BQ8WU58 562 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 CAVIN3Q969G5 261 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 PPCDCQ96CD2 204 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 MTERF3Q96E29 417 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 C1GALT1C1Q96EU7 318 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 RMND5BQ96G75 393 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-206ENST00000420121 ZFP3Q96NJ6 502 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 NPAS1Q99742 590 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 TM9SF2Q99805 663 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 KLHDC3Q9BQ90 382 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 TMEM109Q9BVC6 243 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 SFXN3Q9BWM7 321 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 ROPN1BQ9BZX4 212 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-206ENST00000420121 ROPN1Q9HAT0 212 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-206ENST00000420121 FBXO34Q9NWN3 711 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 SH3BP4Q9P0V3 963 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 ATP6V1HQ9UI12 483 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 ZDHHC2Q9UIJ5 367 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 ZNF337Q9Y3M9 751 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 HEATR5AQ86XA9 2040 aa9.97□□□□□ -0.81
SSBP3-206ENST00000420121 C2CD3Q4AC94 2353 aa9.96□□□□□ -0.81
SSBP3-206ENST00000420121 OR2M5A3KFT3 312 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 EEF1E1-BLOC1S5C9J1V9 151 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 SCAMP2O15127 329 aaKnown RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 EEF1E1O43324 174 aaKnown RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 ANGPTL1O95841 491 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 CHEK2O96017 543 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms