RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PPIAP62937 165 aaKnown RBP17.04■□□□□ 0.32
PTCD3-204ENST00000418628 POU6F2P78424 691 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-204ENST00000418628 SRSF1Q07955 248 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTCD3-204ENST00000418628 AP1ARQ63HQ0 302 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 TIGD3Q6B0B8 471 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 HEPHL1Q6MZM0 1159 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 Q6ZPB1 254 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-204ENST00000418628 CHDHQ8NE62 594 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-204ENST00000418628 OR5D16Q8NGK9 328 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 C10orf82Q8WW14 230 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 JADE3Q92613 823 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 GTF2H4Q92759 462 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 PANX1Q96RD7 426 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 SLC35A5Q9BS91 424 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 RTN4RQ9BZR6 473 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 FBXO34Q9NWN3 711 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 KLHL14Q9P2G3 628 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 FAF1Q9UNN5 650 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-204ENST00000418628 C15orf41Q9Y2V0 281 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 LIPGQ9Y5X9 500 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 ICE1Q9Y2F5 2266 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 MED12LQ86YW9 2145 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 A0A1B0GVC2 190 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 CCDC154A6NI56 674 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 NPIPB9F8W1W9 429 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 STSP08842 583 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 CELA3AP09093 270 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 ELAVL4P26378 380 aaKnown RBP17.03■□□□□ 0.32
PTCD3-204ENST00000418628 PLGLB1Q02325 96 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 FUT5Q11128 374 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 GRAMD1BQ3KR37 738 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 LRIF1Q5T3J3 769 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 GFRALQ6UXV0 394 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 PACS2Q86VP3 889 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 GHDCQ8N2G8 530 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 WDSUB1Q8N9V3 476 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 ADAMTS15Q8TE58 950 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 ZFP90Q8TF47 636 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 KLRF1Q9NZS2 232 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 CCDC167Q9P0B6 97 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 TRIM33Q9UPN9 1127 aa17.03■□□□□ 0.32
PTCD3-204ENST00000418628 USP9YO00507 2555 aaPredicted RBP17.03■□□□□ 0.32
PTCD3-204ENST00000418628 INTS1Q8N201 2190 aaKnown RBP17.02■□□□□ 0.32
PTCD3-204ENST00000418628 RFXANKO14593 260 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 UTS2O95399 124 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 HPNP05981 417 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 GUSBP08236 651 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 MATN1P21941 496 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 MAGEA8P43361 318 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 TRPC1P48995 793 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 TXNL4AP83876 142 aaKnown RBP17.02■□□□□ 0.32
PTCD3-204ENST00000418628 HSF1Q00613 529 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 DCST2Q5T1A1 773 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 CCNJQ5T5M9 372 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 FIGNL1Q6PIW4 674 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 ANGPTL8Q6UXH0 198 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 APOOLQ6UXV4 268 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 TRIML2Q8N7C3 387 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 FADS6Q8N9I5 356 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 SPDL1Q96EA4 605 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 ITCHQ96J02 903 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 G6PC3Q9BUM1 346 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 PAIP1Q9H074 479 aaKnown RBP17.02■□□□□ 0.32
PTCD3-204ENST00000418628 OR51I1Q9H343 314 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 RABEP2Q9H5N1 569 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 RMND5AQ9H871 391 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 ACKR4Q9NPB9 350 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 FAM53CQ9NYF3 392 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 GMEB1Q9Y692 573 aa17.02■□□□□ 0.32
PTCD3-204ENST00000418628 IGLV3-32A0A0A0MS00 114 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 TRBV5-3A0A0A0MS03 114 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 DUXAA6NLW8 204 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 C17orf51A8MQB3 221 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 ALG1L2C9J202 215 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 ZIC2O95409 532 aaPredicted RBP17.01■□□□□ 0.31
PTCD3-204ENST00000418628 OXSR1O95747 527 aaPredicted RBP17.01■□□□□ 0.31
PTCD3-204ENST00000418628 AK1P00568 194 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 GSNP06396 782 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 ENDOUP21128 410 aaKnown RBP17.01■□□□□ 0.31
PTCD3-204ENST00000418628 TBXA2RP21731 343 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 ARFIP2P53365 341 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 GTDC1Q4AE62 458 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 SLC2A7Q6PXP3 512 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 DNAJC14Q6Y2X3 702 aaPredicted RBP17.01■□□□□ 0.31
PTCD3-204ENST00000418628 TRILQ7L0X0 811 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 GALNT10Q86SR1 603 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 MSRB3Q8IXL7 192 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 TSPEARQ8WU66 669 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 CHMP6Q96FZ7 201 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 ZNF350Q9GZX5 532 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 B4GALT7Q9UBV7 327 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 PCDHGB3Q9Y5G1 929 aa17.01■□□□□ 0.31
PTCD3-204ENST00000418628 A0A096LPI6 279 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 A0A1W2PQD3 144 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 PRAMEF27A3QJZ7 478 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 HMGN4O00479 90 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 NR5A2O00482 541 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 SUSD5O60279 629 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 MASP1P48740 699 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 KHKP50053 298 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms