RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DEFB127Q9H1M4 99 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 OR51I1Q9H343 314 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 GALNT9Q9HCQ5 603 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 A0A1W2PP18 115 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 LRRC3CA6NJW4 275 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 SNPHO15079 494 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 FADS1O60427 444 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 CDC40O60508 579 aaKnown RBP eCLIP21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 LSP1P33241 339 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 MAGEA5P43359 124 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 RNF138Q8WVD3 245 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 XAGE5Q8WWM1 108 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 UBQLN4Q9NRR5 601 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 WIF1Q9Y5W5 379 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 KCNE3Q9Y6H6 103 aa21.11■□□□□ 0.97
SMARCB1-205ENST00000417137 A0A096LPI6 279 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 GMNCA6NCL1 334 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 C2orf72A6NCS6 295 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 GNB5O14775 395 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 CBR3O75828 277 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 NGFRP08138 427 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 RFPL3SP0C7P2 107 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 OR12D1P0DN82 309 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 GDF1P27539 372 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 UQCRFS1P47985 274 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 GYS2P54840 703 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 CCNJQ5T5M9 372 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 TNFAIP8L2Q6P589 184 aaPredicted RBP21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 SLC2A7Q6PXP3 512 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 C16orf62Q7Z3J2 963 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 CPLX4Q7Z7G2 160 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 RNF130Q86XS8 419 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 CHDHQ8NE62 594 aaPredicted RBP21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 PRR7Q8TB68 274 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 ZFP90Q8TF47 636 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 GNRHR2Q96P88 292 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 LDAHQ9H6V9 325 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 ZNF703Q9H7S9 590 aaPredicted RBP21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 C15orf41Q9Y2V0 281 aa21.1■□□□□ 0.97
SMARCB1-205ENST00000417137 SCDO00767 359 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 SCO2O43819 266 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 WISP2O76076 250 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 PDE9AO76083 593 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 TBXA2RP21731 343 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 SEC24CP53992 1094 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 CASP9P55211 416 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 GNGT1P63211 74 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 EIF2S3LQ2VIR3 472 aaKnown RBP21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 GRAMD1BQ3KR37 738 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 ARHGAP11BQ3KRB8 267 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 FNDC7Q5VTL7 733 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 ARHGAP11AQ6P4F7 1023 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 DNAJC14Q6Y2X3 702 aaPredicted RBP21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 GALNT10Q86SR1 603 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 PLCZ1Q86YW0 608 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 ZNF527Q8NB42 609 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 OR4C3Q8NH37 302 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 C10orf82Q8WW14 230 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 SDF2Q99470 211 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 RAD21L1Q9H4I0 556 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 SERHL2Q9H4I8 314 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 TPT1P8Q9HAU6 139 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 ACKR4Q9NPB9 350 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 SLC52A3Q9NQ40 469 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 PPP4R1LQ9P1A2 415 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 LEF1Q9UJU2 399 aaPredicted RBP21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 NDUFAF1Q9Y375 327 aa21.09■□□□□ 0.97
SMARCB1-205ENST00000417137 ANGPT2O15123 496 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 HCN1O60741 890 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 STX11O75558 287 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 TRAPPC6AO75865 159 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 IGHG3P01860 377 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 SNRPB2P08579 225 aaKnown RBP21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 CAPN3P20807 821 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 PTPN6P29350 595 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 ADSLP30566 484 aaPredicted RBP21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 GAS1P54826 345 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 CASP6P55212 293 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 C17orf67Q0P5P2 114 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 TOMM20Q15388 145 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 SPATA21Q7Z572 469 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 ELAC2Q9BQ52 826 aaKnown RBP21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 PAIP1Q9H074 479 aaKnown RBP21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 EXO5Q9H790 373 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 PLSCR2Q9NRY7 297 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 FBXO34Q9NWN3 711 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 THUMPD1Q9NXG2 353 aaKnown RBP21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 FLRT3Q9NZU0 649 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 LIPT1Q9Y234 373 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 OSGIN2Q9Y236 505 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 SHANK1Q9Y566 2161 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 PCDHB14Q9Y5E9 798 aa21.08■□□□□ 0.97
SMARCB1-205ENST00000417137 NUP214P35658 2090 aaPredicted RBP21.08■□□□□ 0.96
SMARCB1-205ENST00000417137 ALG1L2C9J202 215 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 SUSD5O60279 629 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 OXSR1O95747 527 aaPredicted RBP21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 ABOP16442 354 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 FLYWCH1Q4VC44 716 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 HEPHL1Q6MZM0 1159 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 MARCH3Q86UD3 253 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms