RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 OR4K17Q8NGC6 315 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 CEP70Q8NHQ1 597 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 CLHC1Q8NHS4 586 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 FAM110BQ8TC76 370 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 TWIST2Q8WVJ9 160 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 PIK3R3Q92569 461 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 CAVIN3Q969G5 261 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 DTNBP1Q96EV8 351 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 GIMAP5Q96F15 307 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 LRRC46Q96FV0 321 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 TM9SF2Q99805 663 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 C3orf14Q9HBI5 128 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 ACSS1Q9NUB1 689 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-210ENST00000416778 FAM120CQ9NX05 1096 aaKnown RBP16.18■□□□□ 0.18
CPNE1-210ENST00000416778 ZDHHC2Q9UIJ5 367 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 DKKL1Q9UK85 242 aa16.18■□□□□ 0.18
CPNE1-210ENST00000416778 ANKHD1Q8IWZ3 2542 aaKnown RBP16.18■□□□□ 0.18
CPNE1-210ENST00000416778 PIP5K1BO14986 540 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 TYROBPO43914 113 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 NKX2-2O95096 273 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 UTS2O95399 124 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 ASMTP46597 345 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 DGKQP52824 942 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 PRKAG1P54619 331 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 PSMD4P55036 377 aaKnown RBP16.17■□□□□ 0.18
CPNE1-210ENST00000416778 GALNTL6Q49A17 601 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 SPNS3Q6ZMD2 512 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 ZCCHC23Q6ZST2 131 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 TMEM200AQ86VY9 491 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 DDIASQ8IXT1 998 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 NUP43Q8NFH3 380 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 FAM222BQ8WU58 562 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 NRGNQ92686 78 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 MTERF3Q96E29 417 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 ZBED6CLQ96FA7 236 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-210ENST00000416778 C3orf30Q96M34 536 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 RASSF1Q9NS23 344 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 DNAJB12Q9NXW2 375 aaKnown RBP16.17■□□□□ 0.18
CPNE1-210ENST00000416778 CLCF1Q9UBD9 225 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 GIMAP2Q9UG22 337 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 ATP6V1HQ9UI12 483 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 ZNF337Q9Y3M9 751 aa16.17■□□□□ 0.18
CPNE1-210ENST00000416778 IGLV3-32A0A0A0MS00 114 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 PEX11AO75192 247 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 SLU7O95391 586 aaKnown RBP16.16■□□□□ 0.18
CPNE1-210ENST00000416778 TGM6O95932 706 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 BPGMP07738 259 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 PEPDP12955 493 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 HK1P19367 917 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 TCEA1P23193 301 aaKnown RBP16.16■□□□□ 0.18
CPNE1-210ENST00000416778 DNAJA1P31689 397 aaKnown RBP16.16■□□□□ 0.18
CPNE1-210ENST00000416778 GPC1P35052 558 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 SERPINB5P36952 375 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 ETV4P43268 484 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 CLK3P49761 638 aaKnown RBP16.16■□□□□ 0.18
CPNE1-210ENST00000416778 SUCLG1P53597 346 aaKnown RBP16.16■□□□□ 0.18
CPNE1-210ENST00000416778 PRR5P85299 388 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 C17orf67Q0P5P2 114 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 MLC1Q15049 377 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 GLYR1Q49A26 553 aaPredicted RBP16.16■□□□□ 0.18
CPNE1-210ENST00000416778 XKR7Q5GH72 579 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 EXOSC6Q5RKV6 272 aaKnown RBP16.16■□□□□ 0.18
CPNE1-210ENST00000416778 LRIG3Q6UXM1 1119 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 CDRT4Q8N9R6 151 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 SLC16A11Q8NCK7 471 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 OR4C3Q8NH37 302 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 GPR151Q8TDV0 419 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 INTS12Q96CB8 462 aaKnown RBP16.16■□□□□ 0.18
CPNE1-210ENST00000416778 C16orf58Q96GQ5 468 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 ZFP3Q96NJ6 502 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 EQTNQ9NQ60 294 aa16.16■□□□□ 0.18
CPNE1-210ENST00000416778 MPDZO75970 2070 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 EMC8O43402 210 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 HCRTR2O43614 444 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 KCNH1O95259 989 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 ACP2P11117 423 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 EPXP11678 715 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 RFX3P48380 749 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 GRAMD1BQ3KR37 738 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 VPS26BQ4G0F5 336 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 FLYWCH1Q4VC44 716 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 C6orf136Q5SQH8 315 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 ZCCHC12Q6PEW1 402 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 R3HCC1LQ7Z5L2 792 aaKnown RBP16.15■□□□□ 0.18
CPNE1-210ENST00000416778 KIF18BQ86Y91 864 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 GOT1L1Q8NHS2 421 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-210ENST00000416778 ZFP28Q8NHY6 868 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 LINC01560Q8TB33 94 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 NUDT8Q8WV74 236 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 PPP3R2Q96LZ3 170 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 SFXN3Q9BWM7 321 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 POLDIP3Q9BY77 421 aaKnown RBP16.15■□□□□ 0.18
CPNE1-210ENST00000416778 PTGES2Q9H7Z7 377 aa16.15■□□□□ 0.18
CPNE1-210ENST00000416778 AKAP6Q13023 2319 aa16.14■□□□□ 0.18
CPNE1-210ENST00000416778 PCNX3Q9H6A9 2034 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 TUBAL3A6NHL2 446 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 A6NNC1 897 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 TMEM114B3SHH9 223 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 LINC01387J3KSC0 135 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 KCNK2O95069 426 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms