RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 MS4A12Q9NXJ0 267 aa11.71□□□□□ -0.53
LINC00339-202ENST00000416769 FOXD3Q9UJU5 478 aaPredicted RBP11.71□□□□□ -0.53
LINC00339-202ENST00000416769 ADAM29Q9UKF5 820 aa11.71□□□□□ -0.53
LINC00339-202ENST00000416769 PTGDR2Q9Y5Y4 395 aa11.71□□□□□ -0.53
LINC00339-202ENST00000416769 ATRQ13535 2644 aa11.71□□□□□ -0.54
LINC00339-202ENST00000416769 OR6C76A6NM76 312 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 DEFB108AA8MXU0 73 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 H0Y3Z8 333 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 SDHDO14521 159 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 TP53I11O14683 189 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 SNPHO15079 494 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 LSM1O15116 133 aaKnown RBP11.7□□□□□ -0.54
LINC00339-202ENST00000416769 UGT2B11O75310 529 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 SEC22BO75396 215 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 SNX4O95219 450 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 TGM6O95932 706 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 NT5EP21589 574 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 DRD4P21917 467 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 TLX1P31314 330 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-202ENST00000416769 CCKARP32238 428 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 OPRM1P35372 400 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 CPOXP36551 454 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 CPA2P48052 419 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 AQP5P55064 265 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 FAM27E3Q08E93 113 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 MGAT2Q10469 447 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 LTB4RQ15722 352 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 SLC9B1Q4ZJI4 515 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 SPIN4Q56A73 249 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 SPDYAQ5MJ70 313 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 TBCELQ5QJ74 424 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 C6orf136Q5SQH8 315 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 HLA-DQA1Q5Y7H0 255 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 CGB2Q6NT52 195 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 C22orf34Q6ZV56 151 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 LARP4Q71RC2 724 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC00339-202ENST00000416769 PAGE2Q7Z2X7 111 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 MAVSQ7Z434 540 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 CPLX4Q7Z7G2 160 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 ADGRE4PQ86SQ3 457 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 PM20D2Q8IYS1 436 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 DND1Q8IYX4 353 aaKnown RBP11.7□□□□□ -0.54
LINC00339-202ENST00000416769 ADCY4Q8NFM4 1077 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 CEP70Q8NHQ1 597 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 ACTRT2Q8TDY3 377 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 TUBGCP3Q96CW5 907 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 C11orf24Q96F05 449 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-202ENST00000416769 LRRC46Q96FV0 321 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 APIPQ96GX9 242 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 HS3ST6Q96QI5 342 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 CCDC28BQ9BUN5 200 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 MRPL1Q9BYD6 325 aaKnown RBP11.7□□□□□ -0.54
LINC00339-202ENST00000416769 NSRP1Q9H0G5 558 aaKnown RBP11.7□□□□□ -0.54
LINC00339-202ENST00000416769 METTL7AQ9H8H3 244 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 AKTIPQ9H8T0 292 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 CALHM2Q9HA72 323 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 LRTM1Q9HBL6 345 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 NPHS2Q9NP85 383 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 BEX4Q9NWD9 120 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-202ENST00000416769 KLHL28Q9NXS3 571 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 CLCF1Q9UBD9 225 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 HEY2Q9UBP5 337 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 FBXL2Q9UKC9 423 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 TMED5Q9Y3A6 229 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 TESMINQ9Y4I5 508 aa11.7□□□□□ -0.54
LINC00339-202ENST00000416769 RAI1Q7Z5J4 1906 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-202ENST00000416769 FBN1P35555 2871 aaKnown RBP11.69□□□□□ -0.54
LINC00339-202ENST00000416769 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 INAFM1C9JVW0 142 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 ICOSLGO75144 302 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 PEX11AO75192 247 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 PPM1BO75688 479 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 TNFSF13O75888 250 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 IL18BPO95998 194 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 CYP4B1P13584 511 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 PCSK2P16519 638 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 LBPP18428 481 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 IDH3AP50213 366 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 EMX2Q04743 252 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 ACSM2AQ08AH3 577 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 MAD2L1Q13257 205 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-202ENST00000416769 ATP6AP1LQ52LC2 224 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 RFTN2Q52LD8 501 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-202ENST00000416769 ACSM2BQ68CK6 577 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 OR5M10Q6IEU7 315 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 OR52E8Q6IFG1 317 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 GALNT18Q6P9A2 607 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 VWA1Q6PCB0 445 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 CYP20A1Q6UW02 462 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 C1orf52Q8N6N3 182 aaKnown RBP11.69□□□□□ -0.54
LINC00339-202ENST00000416769 OR1J4Q8NGS1 313 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 RFWD2Q8NHY2 731 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 NUDT8Q8WV74 236 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 TP53INP1Q96A56 240 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 OMA1Q96E52 524 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 PERPQ96FX8 193 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 PPP1R36Q96LQ0 422 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 DACH2Q96NX9 599 aa11.69□□□□□ -0.54
LINC00339-202ENST00000416769 PELOQ9BRX2 385 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms