RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 VPS29Q9UBQ0 182 aa9□□□□□ -0.97
MDC1-202ENST00000416571 MCM8Q9UJA3 840 aa9□□□□□ -0.97
MDC1-202ENST00000416571 MRTO4Q9UKD2 239 aaKnown RBP9□□□□□ -0.97
MDC1-202ENST00000416571 MCTS1Q9ULC4 181 aaKnown RBP9□□□□□ -0.97
MDC1-202ENST00000416571 CLEC4AQ9UMR7 237 aa9□□□□□ -0.97
MDC1-202ENST00000416571 UTP11Q9Y3A2 253 aaKnown RBP9□□□□□ -0.97
MDC1-202ENST00000416571 AP4B1Q9Y6B7 739 aa9□□□□□ -0.97
MDC1-202ENST00000416571 MXRA5Q9NR99 2828 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 ROS1P08922 2347 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 SONP18583 2426 aaKnown RBP8.99□□□□□ -0.97
MDC1-202ENST00000416571 B4DXG7 233 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 CLOCKO15516 846 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 RAD51CO43502 376 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 GMFGO60234 142 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 SOX30O94993 753 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 SYNGR4O95473 234 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 IL3P08700 152 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 PSMD4P55036 377 aaKnown RBP8.99□□□□□ -0.97
MDC1-202ENST00000416571 CAPRIN1Q14444 709 aaKnown RBP8.99□□□□□ -0.97
MDC1-202ENST00000416571 GUSBP1Q15486 140 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 ZNHIT3Q15649 155 aaPredicted RBP8.99□□□□□ -0.97
MDC1-202ENST00000416571 DECR1Q16698 335 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 GLYR1Q49A26 553 aaPredicted RBP8.99□□□□□ -0.97
MDC1-202ENST00000416571 CYP27C1Q4G0S4 372 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 LGSNQ5TDP6 509 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 STAC2Q6ZMT1 411 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 DUSP19Q8WTR2 217 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 FBXW5Q969U6 566 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 C1GALT1C1Q96EU7 318 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 GPR78Q96P69 363 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 BBS4Q96RK4 519 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 TBL1XR1Q9BZK7 514 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 RAB17Q9H0T7 212 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 Q9N2J8 555 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 NGBQ9NPG2 151 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 FAM120CQ9NX05 1096 aaKnown RBP8.99□□□□□ -0.97
MDC1-202ENST00000416571 PAQR5Q9NXK6 330 aaPredicted RBP8.99□□□□□ -0.97
MDC1-202ENST00000416571 GPR52Q9Y2T5 361 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 RNF115Q9Y4L5 304 aa8.99□□□□□ -0.97
MDC1-202ENST00000416571 A0A1W2PP18 115 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 HMX2A2RU54 273 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 CD5LO43866 347 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 PCDH7O60245 1069 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 FADS1O60427 444 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 PLOD3O60568 738 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 SS18L1O75177 396 aaPredicted RBP8.98□□□□□ -0.97
MDC1-202ENST00000416571 OR4F21O95013 312 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 KRT6AP02538 564 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 KRT6BP04259 564 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 RPS17P08708 135 aaKnown RBP8.98□□□□□ -0.97
MDC1-202ENST00000416571 HSD3B1P14060 373 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 TSPAN8P19075 237 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 HSD3B2P26439 372 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 PHBP35232 272 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 KRT6CP48668 564 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 CDH13P55290 713 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 PSG6Q00889 435 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 C17orf67Q0P5P2 114 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 CSTF3Q12996 717 aaKnown RBP8.98□□□□□ -0.97
MDC1-202ENST00000416571 TSNAXIP1Q2TAA8 658 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 CHRFAM7AQ494W8 412 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 LETMD1Q6P1Q0 360 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 RPS27LQ71UM5 84 aaKnown RBP8.98□□□□□ -0.97
MDC1-202ENST00000416571 MARCH3Q86UD3 253 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 HIPK1Q86Z02 1210 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 WDR75Q8IWA0 830 aaKnown RBP8.98□□□□□ -0.97
MDC1-202ENST00000416571 PLD6Q8N2A8 252 aaKnown RBP8.98□□□□□ -0.97
MDC1-202ENST00000416571 STEAP2Q8NFT2 490 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 OR7G2Q8NG99 324 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 OR10D3Q8NH80 312 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 FBXO25Q8TCJ0 367 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 ZBED6CLQ96FA7 236 aaPredicted RBP8.98□□□□□ -0.97
MDC1-202ENST00000416571 TMEM204Q9BSN7 226 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 SHCBP1LQ9BZQ2 653 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 OR10A4Q9H209 315 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 ESRP2Q9H6T0 727 aaKnown RBP8.98□□□□□ -0.97
MDC1-202ENST00000416571 C12orf49Q9H741 205 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 SLC35C2Q9NQQ7 365 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 GLRX2Q9NS18 164 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 VDAC3Q9Y277 283 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 SNX8Q9Y5X2 465 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 CR1P17927 2039 aa8.98□□□□□ -0.97
MDC1-202ENST00000416571 A8MV72 311 aaPredicted RBP8.97□□□□□ -0.97
MDC1-202ENST00000416571 PPP6CO00743 305 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 ANGPTL1O95841 491 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 JUNP05412 331 aaKnown RBP8.97□□□□□ -0.97
MDC1-202ENST00000416571 FESP07332 822 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 TUBBP07437 444 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 CD3EP07766 207 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 ZNF17P17021 662 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 PSMB1P20618 241 aaKnown RBP8.97□□□□□ -0.97
MDC1-202ENST00000416571 IL11P20809 199 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 ME2P23368 584 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 IL32P24001 234 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 HMOX2P30519 316 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 ACVR1BP36896 505 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 CDKN1AP38936 164 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 NCBP2P52298 156 aaKnown RBP eCLIP8.97□□□□□ -0.97
MDC1-202ENST00000416571 ACSM2AQ08AH3 577 aa8.97□□□□□ -0.97
MDC1-202ENST00000416571 CTU2Q2VPK5 515 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms