RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 FOXK1P85037 733 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 ZFP69Q49AA0 526 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 FAM205BPQ63HN1 556 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CGB2Q6NT52 195 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 TMPPEQ6ZT21 453 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 GATSQ8NAP1 163 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 MVB12AQ96EY5 273 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 DPAGT1Q9H3H5 408 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 TMEM38AQ9H6F2 299 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 NMNAT1Q9HAN9 279 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 SLC1A7O00341 560 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 WBP4O75554 376 aaKnown RBP11.25□□□□□ -0.61
PTPRF-205ENST00000414879 MTRF1O75570 445 aaKnown RBP11.25□□□□□ -0.61
PTPRF-205ENST00000414879 NPPBP16860 134 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 PFN3P60673 137 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 CSNK1G2P78368 415 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 PGM2L1Q6PCE3 622 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 FAM180AQ6UWF9 173 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 VTCN1Q7Z7D3 282 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 TMEFF1Q8IYR6 380 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 OR52R1Q8NGF1 315 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 NEURL3Q96EH8 262 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 MYO9BQ13459 2157 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 RFXAPO00287 272 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ITGA5P08648 1049 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ALKBH2Q6NS38 261 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF761Q86XN6 746 aaPredicted RBP11.25□□□□□ -0.61
PTPRF-205ENST00000414879 CLIP4Q8N3C7 705 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 IP6K3Q96PC2 410 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 MNTQ99583 582 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 B3GNT4Q9C0J1 378 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 OLAHQ9NV23 265 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 CLEC4AQ9UMR7 237 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 SLC6A14Q9UN76 642 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 STUB1Q9UNE7 303 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 WASF3Q9UPY6 502 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 DHDHQ9UQ10 334 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 NSG1A0A0A6YYJ2 146 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ISPDA4D126 451 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 C5orf67F2Z3F1 127 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 GLP1RP43220 463 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 GPR18Q14330 331 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 GTDC1Q4AE62 458 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ABHD17CQ6PCB6 329 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ZER1Q7Z7L7 766 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 LMNTD1Q8N9Z9 388 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 CCDC54Q8NEL0 328 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 C12orf43Q96C57 262 aaKnown RBP11.25□□□□□ -0.61
PTPRF-205ENST00000414879 KLHL15Q96M94 604 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 A4GALTQ9NPC4 353 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 C2orf42Q9NWW7 574 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 EIF3KQ9UBQ5 218 aaKnown RBP11.25□□□□□ -0.61
PTPRF-205ENST00000414879 SCP2D1Q9UJQ7 156 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 KCND3Q9UK17 655 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 TMPRSS11EQ9UL52 423 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 BOKQ9UMX3 212 aaPredicted RBP11.25□□□□□ -0.61
PTPRF-205ENST00000414879 A0A0U1RQS6 177 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 PRRT4C9JH25 899 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 C11orf98E9PRG8 122 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 TFECO14948 347 aaPredicted RBP11.25□□□□□ -0.61
PTPRF-205ENST00000414879 SCRG1O75711 98 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 CPNE6O95741 557 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ALDOCP09972 364 aaKnown RBP11.25□□□□□ -0.61
PTPRF-205ENST00000414879 CDH15P55291 814 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ABCA11PQ4W5N1 156 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 XKR7Q5GH72 579 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ARL14Q8N4G2 192 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 OR51Q1Q8NH59 317 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 OR14L1PQ8NHC6 308 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 WASH6PQ9NQA3 447 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 PRDM9Q9NQV7 894 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF337Q9Y3M9 751 aa11.25□□□□□ -0.61
PTPRF-205ENST00000414879 DISC1C4P0D8 188 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 CELP19835 753 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 SLC6A12P48065 614 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 CTXN1P60606 82 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 RAB40BQ12829 278 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 MAD2L1BPQ15013 274 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-205ENST00000414879 ALG10Q5BKT4 473 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 XKRXQ6PP77 449 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 XKR5Q6UX68 686 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 Q6ZSR9 355 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF627Q7L945 461 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 PTRH1Q86Y79 214 aaKnown RBP11.24□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF548Q8NEK5 533 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-205ENST00000414879 ELP5Q8TE02 316 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 PRR11Q96HE9 360 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-205ENST00000414879 CDC6Q99741 560 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 TAS2R10Q9NYW0 307 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF443Q9Y2A4 671 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-205ENST00000414879 LRRN3E7EW58 273 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 RGS9O75916 674 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-205ENST00000414879 FRKP42685 505 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-205ENST00000414879 CDKN2CP42773 168 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 SLC48A1Q6P1K1 146 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF704Q6ZNC4 412 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-205ENST00000414879 LAS2Q8IYD9 372 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 OR13H1Q8NG92 308 aa11.24□□□□□ -0.61
PTPRF-205ENST00000414879 NEIL3Q8TAT5 605 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms