RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 REEP3Q6NUK4 255 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 C19orf48Q6RUI8 117 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 ISLR2Q6UXK2 745 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 YTHDF3Q7Z739 585 aaKnown RBP12.06□□□□□ -0.48
CNOT4-204ENST00000414802 ULK2Q8IYT8 1036 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 OR10G3Q8NGC4 313 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 FAM110BQ8TC76 370 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 FIG4Q92562 907 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 DIO2Q92813 273 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 SPACA9Q96E40 222 aaPredicted RBP12.06□□□□□ -0.48
CNOT4-204ENST00000414802 COL21A1Q96P44 957 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 TRNT1Q96Q11 434 aaKnown RBP12.06□□□□□ -0.48
CNOT4-204ENST00000414802 SPATA9Q9BWV2 254 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 PCDHAC1Q9H158 963 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 HPF1Q9NWY4 346 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 THUMPD1Q9NXG2 353 aaKnown RBP12.06□□□□□ -0.48
CNOT4-204ENST00000414802 STMN3Q9NZ72 180 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 LIPT1Q9Y234 373 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 MED12Q93074 2177 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 SVILO95425 2214 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 CACNA1BQ00975 2339 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 ANKRD65E5RJM6 399 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 GSTA4O15217 222 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 RRP9O43818 475 aaKnown RBP12.06□□□□□ -0.48
CNOT4-204ENST00000414802 KIAA0513O60268 411 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 STX11O75558 287 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 UTS2O95399 124 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 OPN1SWP03999 348 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 HSD17B1P14061 328 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 KCNJ2P63252 427 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 OC90Q02509 493 aaPredicted RBP12.06□□□□□ -0.48
CNOT4-204ENST00000414802 RBBP4Q09028 425 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.06□□□□□ -0.48
CNOT4-204ENST00000414802 GRAMD1BQ3KR37 738 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 BICRALQ6AI39 1079 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 ERICH5Q6P6B1 374 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 OPN5Q6U736 354 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 LRRC74BQ6ZQY2 392 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 CYP4Z2PQ8N1L4 340 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 SLC15A4Q8N697 577 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 ZNF614Q8N883 585 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 HIPK4Q8NE63 616 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 HGDQ93099 445 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 UTP4Q969X6 686 aaKnown RBP12.06□□□□□ -0.48
CNOT4-204ENST00000414802 NODALQ96S42 347 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 TREX2Q9BQ50 279 aaPredicted RBP12.06□□□□□ -0.48
CNOT4-204ENST00000414802 ABI3Q9P2A4 366 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 BOD1L1Q8NFC6 3051 aa12.06□□□□□ -0.48
CNOT4-204ENST00000414802 HAX1O00165 279 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 CXCR6O00574 342 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 GCM2O75603 506 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-204ENST00000414802 ME2P23368 584 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 HTR1EP28566 365 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 DCTP40126 519 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 TMED10P49755 219 aaKnown RBP12.05□□□□□ -0.48
CNOT4-204ENST00000414802 POLE2P56282 527 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 MFAP5Q13361 173 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 TUBA3CQ13748 450 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 NTRK2Q16620 822 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 ZNF791Q3KP31 576 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-204ENST00000414802 LRRC23Q53EV4 343 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-204ENST00000414802 TUBA3EQ6PEY2 450 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 ZNF619Q8N2I2 560 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 FBXW8Q8N3Y1 598 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 BBS10Q8TAM1 723 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 SNRNP27Q8WVK2 155 aaKnown RBP12.05□□□□□ -0.48
CNOT4-204ENST00000414802 ZG16BQ96DA0 208 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 G6PC3Q9BUM1 346 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 KCNE5Q9UJ90 142 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 MRTO4Q9UKD2 239 aaKnown RBP12.05□□□□□ -0.48
CNOT4-204ENST00000414802 CSAG2Q9Y5P2 127 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 SPENQ96T58 3664 aaKnown RBP12.05□□□□□ -0.48
CNOT4-204ENST00000414802 DNAJC13O75165 2243 aa12.05□□□□□ -0.48
CNOT4-204ENST00000414802 ZNF407Q9C0G0 2248 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 OR6C70A6NIJ9 312 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 C17orf51A8MQB3 221 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 G3V3Y1 287 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 ARPC2O15144 300 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 SCO2O43819 266 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 HS6ST1O60243 411 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 SOX30O94993 753 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 PGM3O95394 542 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 OXSR1O95747 527 aaPredicted RBP12.04□□□□□ -0.48
CNOT4-204ENST00000414802 PDGFAP04085 211 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 CCL3P10147 92 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 GGT1P19440 569 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 ATP6V1B2P21281 511 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 CD96P40200 585 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 HLCSP50747 726 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 PNLIPRP2P54317 469 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 PSMD4P55036 377 aaKnown RBP12.04□□□□□ -0.48
CNOT4-204ENST00000414802 PCBP3P57721 371 aaKnown RBP12.04□□□□□ -0.48
CNOT4-204ENST00000414802 MAPK14Q16539 360 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 PDZK1Q5T2W1 519 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 PRAMEF20Q5VT98 475 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 PGM2L1Q6PCE3 622 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 MDGA2Q7Z553 956 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 ARHGAP24Q8N264 748 aa12.04□□□□□ -0.48
CNOT4-204ENST00000414802 GATSQ8NAP1 163 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms