RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 NPPAP01160 153 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 COX4I1P13073 169 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 CALB2P22676 271 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 NTSP30990 170 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 MAN2A2P49641 1150 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 RASSF2P50749 326 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 NR0B1P51843 470 aaKnown RBP12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 RHAGQ02094 409 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 STX4Q12846 297 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 SLC13A2Q13183 592 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 VPS26BQ4G0F5 336 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 SPANXN4Q5MJ08 99 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 C18orf63Q68DL7 685 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 C6orf89Q6UWU4 347 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 GK5Q6ZS86 529 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 MDGA2Q7Z553 956 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 GPALPP1Q8IXQ4 340 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 FBXW8Q8N3Y1 598 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 FAM47BQ8NA70 645 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 OR7A2PQ8NGA2 310 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 OR9I1Q8NGQ6 314 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 KLHL29Q96CT2 875 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 ITCHQ96J02 903 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 TEX37Q96LM6 180 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 BBS4Q96RK4 519 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 PELOQ9BRX2 385 aaKnown RBP12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 DEFB126Q9BYW3 111 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 TTTY12Q9BZ98 90 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 GSX2Q9BZM3 304 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 ACSS1Q9NUB1 689 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 NDE1Q9NXR1 346 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 LEF1Q9UJU2 399 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 CES1P1Q9UKY3 287 aa12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 EXO1Q9UQ84 846 aaKnown RBP12.39□□□□□ -0.43
RAPGEF1-204ENST00000414781 A0A1W2PRB8 838 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 RNASET2O00584 256 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 PGRMC2O15173 223 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 PDPK1O15530 556 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 ERAL1O75616 437 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 GLSO94925 669 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 SLITRK5O94991 958 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 TP53P04637 393 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 LAMP1P11279 417 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 IL12AP29459 219 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 TRPC1P48995 793 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 XKP51811 444 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 SNRPNP63162 240 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 MLC1Q15049 377 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 CHRFAM7AQ494W8 412 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 QSOX2Q6ZRP7 698 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 CCDC121Q6ZUS5 278 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 SNX32Q86XE0 403 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 PSD4Q8NDX1 1056 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 OR2M7Q8NG81 312 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 EXOSC8Q96B26 276 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 RBM18Q96H35 190 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 GID8Q9NWU2 228 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 ALKBH4Q9NXW9 302 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 BTNL2Q9UIR0 455 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 LIPGQ9Y5X9 500 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 CUBNO60494 3623 aa12.38□□□□□ -0.43
RAPGEF1-204ENST00000414781 OR2W5A6NFC9 320 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 GLOD5A6NK44 160 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 MYO1GB0I1T2 1018 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 DYRK3O43781 588 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 HCN1O60741 890 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 ERN1O75460 977 aaKnown RBP12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 SLC35E2P0CK97 266 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 PORP16435 677 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 MANFP55145 182 aaKnown RBP12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 TIGD2Q4W5G0 525 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 OR4F3Q6IEY1 312 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 C20orf204Q6ZNR8 217 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 TREML1Q86YW5 311 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 LRRC25Q8N386 305 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 TRIML2Q8N7C3 387 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 OR5P2Q8WZ92 322 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 TSLPQ969D9 159 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 ROPN1LQ96C74 230 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 PTCHD1Q96NR3 888 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 PANX1Q96RD7 426 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 CSF3RQ99062 836 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 LANCL2Q9NS86 450 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 DEPPQ9NTK1 212 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 ERVK-11Q9UQG0 969 aa12.37□□□□□ -0.43
RAPGEF1-204ENST00000414781 MPDZO75970 2070 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 SAGE2PA6NJ88 616 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 RFXANKO14593 260 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 CASKO14936 926 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 OR10H2O60403 315 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 UBOX5O94941 541 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 KCNH1O95259 989 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 ANP32DO95626 131 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 KRT16P08779 473 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 CPMP14384 443 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 CEACAM8P31997 349 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 GALNSP34059 522 aa12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 FRKP42685 505 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 HNRNPFP52597 415 aaKnown RBP12.36□□□□□ -0.43
RAPGEF1-204ENST00000414781 KRTAP24-1Q3LI83 254 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms