RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 MYH14Q7Z406 1995 aaKnown RBP2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 EI24O14681 340 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 TYROBPO43914 113 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 RHBDL1O75783 438 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 PDE5AO76074 875 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 HOXB7P09629 217 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 ACP1P24666 158 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 SLC6A8P48029 635 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 NUMBP49757 651 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 SGSHP51688 502 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 HSPA2P54652 639 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 RIPK4P57078 832 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 NLRP11P59045 1033 aaKnown RBP2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 HAND2P61296 217 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 AP1B1Q10567 949 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZSWIM7Q19AV6 140 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 SLC22A6Q4U2R8 563 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 ADAMTSL5Q6ZMM2 481 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 DPY19L2P2Q6ZN68 376 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 CENPQQ7L2Z9 268 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 ADAMTSL2Q86TH1 951 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 BATF2Q8N1L9 274 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 PYROXD2Q8N2H3 581 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 MLKLQ8NB16 471 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 DLX4Q92988 240 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 CCDC51Q96ER9 411 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 PIWIL1Q96J94 861 aaKnown RBP2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 SPATA13Q96N96 652 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 NLNQ9BYT8 704 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 TNFRSF19Q9NS68 423 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 CENPMQ9NSP4 180 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 IL19Q9UHD0 177 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 DNPEPQ9ULA0 475 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 SLC9A8Q9Y2E8 581 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 RPH3AQ9Y2J0 694 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 RNF115Q9Y4L5 304 aa2.84□□□□□ -1.95
HMGB1P11-201ENST00000413899 KIAA1551Q9HCM1 1747 aa2.84□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZNF646O15015 1829 aaPredicted RBP2.84□□□□□ -1.96
HMGB1P11-201ENST00000413899 BRWD3Q6RI45 1802 aa2.84□□□□□ -1.96
HMGB1P11-201ENST00000413899 CHD4Q14839 1912 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 A0A0U1RRA0 63 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 TMEM89A2RUT3 159 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 K7ERI5 159 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZBTB14O43829 449 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 TSC22D2O75157 780 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 GJB5O95377 273 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 PRAMEF12O95522 483 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 ECDO95905 644 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 PGK2P07205 417 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 GIG44P09565 113 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 UMPSP11172 480 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 VDRP11473 427 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 AHCYP23526 432 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 MAGEA4P43358 317 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 IST1P53990 364 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZNF33BQ06732 778 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 SMC1AQ14683 1233 aaKnown RBP2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZNF699Q32M78 642 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 ACSF3Q4G176 576 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 CMPK2Q5EBM0 449 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 SEL1L2Q5TEA6 688 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 CGB2Q6NT52 195 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 OLFM4Q6UX06 510 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 GCNT7Q6ZNI0 430 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 C1orf186Q6ZWK4 172 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 NAXDQ8IW45 347 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 LRRC17Q8N6Y2 441 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 LEMD2Q8NC56 503 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 OR52E1Q8NGJ3 308 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 VN1R17PQ8TDU5 208 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 GTSF1Q8WW33 167 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 TMEM186Q96B77 213 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 PPP1R16AQ96I34 528 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 C9orf85Q96MD7 179 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 DEFB118Q96PH6 123 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 COQ7Q99807 217 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 TSPY26PQ9H489 355 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 THAP9Q9H5L6 903 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 ADGRL4Q9HBW9 690 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 MBD2Q9UBB5 411 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 STRAPQ9Y3F4 350 aaKnown RBP2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 KIF16BQ96L93 1317 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 MYH13Q9UKX3 1938 aa2.83□□□□□ -1.96
HMGB1P11-201ENST00000413899 TNRC6CQ9HCJ0 1690 aaKnown RBP2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 TNS1Q9HBL0 1735 aaKnown RBP2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 MAST2Q6P0Q8 1798 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 AKAP11Q9UKA4 1901 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 FAM168BA1KXE4 195 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 TRABD2BA6NFA1 517 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 TRIM64A6NGJ6 449 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 TRIM64BA6NI03 449 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 SAP18O00422 153 aaKnown RBP2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 CFLARO15519 480 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 HTATSF1O43719 755 aaKnown RBP2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 BCAS2O75934 225 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 STK17BO94768 372 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 TOXO94900 526 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 GSTA1P08263 222 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 WNT2P09544 360 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms