RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CD200R1LQ6Q8B3 271 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 ZNF687Q8N1G0 1237 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 C17orf47Q8NEP4 570 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 ING5Q8WYH8 240 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 BBS4Q96RK4 519 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 CHIAQ9BZP6 476 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 COL4A3Q01955 1670 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 DOCK9Q9BZ29 2069 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 DENND4CQ5VZ89 1909 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 QSOX1O00391 747 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 SLC22A5O76082 557 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 SRPRAP08240 638 aaKnown RBP13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 FGF9P31371 208 aaPredicted RBP13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 SSR2P43308 183 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 DGCR2P98153 550 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 ENTPD8Q5MY95 495 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 C17orf64Q86WR6 236 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 TCEAL8Q8IYN2 117 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 RFLNBQ8N5W9 214 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 FBXO15Q8NCQ5 510 aaPredicted RBP13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 LRRC20Q8TCA0 184 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 WDR34Q96EX3 536 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 LGR4Q9BXB1 951 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 CBLCQ9ULV8 474 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 MPC2O95563 127 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 ACADMP11310 421 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC6A1P30531 599 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 SOX9P48436 509 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 ZNF81P51508 661 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 PLA1AQ53H76 456 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 ZNF322Q6U7Q0 402 aaPredicted RBP13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 TEX261Q6UWH6 196 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 LIX1LQ8IVB5 337 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 CYB561A3Q8NBI2 242 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 OR10H4Q8NGA5 316 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 PRRC1Q96M27 445 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 ZSWIM3Q96MP5 696 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 DHRS9Q9BPW9 319 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 C19orf43Q9BQ61 176 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 OR51V1Q9H2C8 321 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 SCML1Q9UN30 329 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 ATG4BQ9Y4P1 393 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 U3KQ87 197 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 HEATR5BQ9P2D3 2071 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 SURF4O15260 269 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 RFPL3O75679 317 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 LRG1P02750 347 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 HLA-DPB1P04440 258 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 PTHLHP12272 177 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 SNRPBP14678 240 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 ACADLP28330 430 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 MAGEB1P43366 347 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 DEFB103AP81534 67 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 ZNF805Q5CZA5 627 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 MPP7Q5T2T1 576 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 CCNJQ5T5M9 372 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 AADACL4Q5VUY2 407 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 TIGD3Q6B0B8 471 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 KLHL36Q8N4N3 616 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 TFGQ92734 400 aaPredicted RBP13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 IRF7Q92985 503 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 COL26A1Q96A83 441 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 RFT1Q96AA3 541 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 KIAA1143Q96AT1 154 aaPredicted RBP13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 TIFAQ96CG3 184 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 ZC3HAV1LQ96H79 300 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC38A2Q96QD8 506 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 TIMP4Q99727 224 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 PAK6Q9NQU5 681 aaPredicted RBP13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 EXOSC1Q9Y3B2 195 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 NPIPA5A0A0B4J1W7 369 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 NPIPA7E9PJI5 369 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 NDUFS4O43181 175 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 RNF13O43567 381 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 C8AP07357 584 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 NPIPA8P0DM63 369 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 MC3RP41968 323 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 OMPP47874 163 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC7A9P82251 487 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 C12orf40Q86WS4 652 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 KRT78Q8N1N4 520 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 CNRIP1Q96F85 164 aaPredicted RBP13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 HEXA-AS1Q9H8Q6 139 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 TNFRSF10DQ9UBN6 386 aa13.64□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC9B1P1A6NJY1 282 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 KDM4EB2RXH2 506 aaPredicted RBP13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 PDGFAP04085 211 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 GKN3PP0CG01 181 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 PCSK2P16519 638 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 RPS7P62081 194 aaKnown RBP13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 COX10Q12887 443 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 C6orf132Q5T0Z8 1188 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 RNLSQ5VYX0 342 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 CHMP1BQ7LBR1 199 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 KLHDC8AQ8IYD2 350 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 ARL14Q8N4G2 192 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 LRRC17Q8N6Y2 441 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 DNAJA4Q8WW22 397 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms