RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 C7orf26Q96N11 449 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 GNRHR2Q96P88 292 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 NODALQ96S42 347 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 SORT1Q99523 831 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ZBTB18Q99592 522 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 PAIP2Q9BPZ3 127 aaKnown RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 PIGQQ9BRB3 760 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 SIKE1Q9BRV8 207 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 TBL1XR1Q9BZK7 514 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 AKTIPQ9H8T0 292 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 FANCFQ9NPI8 374 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ZCCHC3Q9NUD5 404 aaKnown RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 PPP4R1LQ9P1A2 415 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 BTNL2Q9UIR0 455 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 TINAGQ9UJW2 476 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 LIPT1Q9Y234 373 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 DTX4Q9Y2E6 619 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 FIS1Q9Y3D6 152 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 AP4B1Q9Y6B7 739 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 FLNCQ14315 2725 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ASH1LQ9NR48 2969 aaKnown RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 DIDO1Q9BTC0 2240 aaKnown RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 C15orf38-AP3S2A0A0A6YYH1 394 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 WDR91A4D1P6 747 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 PINLYPA6NC86 204 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 MBD3L4A6NDZ8 208 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 MBD3L3A6NE82 208 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 MBD3L5A6NJ08 208 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 LRRC3CA6NJW4 275 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 GJE1A6NN92 205 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 PRSS44E7EML9 344 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 SYT5O00445 386 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 SCDO00767 359 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 CFLARO15519 480 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ATP8B1O43520 1251 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 AKAP10O43572 662 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 NDUFB5O43674 189 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ITM2AO43736 263 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 EIF4E2O60573 245 aaKnown RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 STX11O75558 287 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 SKAP2O75563 359 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 KCNK2O95069 426 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 RCBTB2O95199 551 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 KRT75O95678 551 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 CLDN1O95832 211 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ANGPTL1O95841 491 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 HMGN2P05204 90 aaKnown RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 RFPL3SP0C7P2 107 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 PABPC4LP0CB38 370 aaKnown RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 ZCCHC18P0CG32 403 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 LAMP1P11279 417 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 COX6B1P14854 86 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ZNF17P17021 662 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 BMP7P18075 431 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 BGNP21810 368 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 DPP4P27487 766 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 SSTR2P30874 369 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 S100A3P33764 101 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 EVI2BP34910 448 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 PTGDSP41222 190 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 PRKAG1P54619 331 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 GAS1P54826 345 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 GFRA1P56159 465 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 CORO7P57737 925 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 RPS3AP61247 264 aaKnown RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 ADORA2A-AS1P86434 159 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 CRYZQ08257 329 aaKnown RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 PMPCAQ10713 525 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ZNF155Q12901 538 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 HSPB3Q12988 150 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 MPP2Q14168 576 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 TOMM20Q15388 145 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 FBXL19-AS1Q494R0 122 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 SPDYE7PQ495Y7 208 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ATAD3BQ5T9A4 648 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 LCE2DQ5TA82 110 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 METTL21CQ5VZV1 264 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ZNF585AQ6P3V2 769 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 FGD2Q7Z6J4 655 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 KIF18BQ86Y91 864 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 MMP21Q8N119 569 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 MEIOBQ8N635 442 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ARFGAP2Q8N6H7 521 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 METTL25Q8N6Q8 603 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 COX18Q8N8Q8 333 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 FADS6Q8N9I5 356 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ACBD4Q8NC06 268 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 SLC16A11Q8NCK7 471 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 CHDHQ8NE62 594 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 FAM83FQ8NEG4 500 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 OR7A2PQ8NGA2 310 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 OR4K17Q8NGC6 315 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 OR10Q1Q8NGQ4 319 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 OR14L1PQ8NHC6 308 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 MBD3L2Q8NHZ7 208 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 LRRC8CQ8TDW0 803 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 DUSP19Q8WTR2 217 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 TSPEARQ8WU66 669 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 SLC9A6Q92581 669 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms