RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 PLIN3O60664 434 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 GLRA3O75311 464 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 SMNDC1O75940 238 aaKnown RBP eCLIP17.32■□□□□ 0.36
CPSF7-204ENST00000413232 IL33O95760 270 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 PEPDP12955 493 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 HOXC12P31275 282 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 RFX3P48380 749 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 MRPS22P82650 360 aaKnown RBP17.32■□□□□ 0.36
CPSF7-204ENST00000413232 ZNF385BQ569K4 471 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 RAET1LQ5VY80 246 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 CLEC6AQ6EIG7 209 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 P4HA3Q7Z4N8 544 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 CNEP1R1Q8N9A8 125 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 GFM2Q969S9 779 aaKnown RBP17.32■□□□□ 0.36
CPSF7-204ENST00000413232 WFIKKN1Q96NZ8 548 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 SMR3AQ99954 134 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 OPN3Q9H1Y3 402 aaPredicted RBP17.32■□□□□ 0.36
CPSF7-204ENST00000413232 DDX18Q9NVP1 670 aaKnown RBP17.32■□□□□ 0.36
CPSF7-204ENST00000413232 C6orf203Q9P0P8 240 aaPredicted RBP17.32■□□□□ 0.36
CPSF7-204ENST00000413232 TESMINQ9Y4I5 508 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 FREM1Q5H8C1 2179 aa17.32■□□□□ 0.36
CPSF7-204ENST00000413232 SEC14L5O43304 696 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 GMFGO60234 142 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 RSL1D1O76021 490 aaKnown RBP17.31■□□□□ 0.36
CPSF7-204ENST00000413232 CGAP01215 116 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 CCKARP32238 428 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 GABRA3P34903 492 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 DIO3P55073 304 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 DNAJB13P59910 316 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 SIRPAP78324 504 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 DECR1Q16698 335 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 C22orf34Q6ZV56 151 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 EXOC3L1Q86VI1 746 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 CXorf67Q86X51 503 aaPredicted RBP17.31■□□□□ 0.36
CPSF7-204ENST00000413232 OR2T11Q8NH01 316 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 FAM76AQ8TAV0 307 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 FNDC9Q8TBE3 224 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 SMPDL3BQ92485 455 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 PIK3R3Q92569 461 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 CIDECQ96AQ7 238 aaPredicted RBP17.31■□□□□ 0.36
CPSF7-204ENST00000413232 CCDC126Q96EE4 140 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 C1GALT1C1Q96EU7 318 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 PGM2Q96G03 612 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 NPAS1Q99742 590 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 PINK1Q9BXM7 581 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 FAM120CQ9NX05 1096 aaKnown RBP17.31■□□□□ 0.36
CPSF7-204ENST00000413232 KLHL28Q9NXS3 571 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 ABCG2Q9UNQ0 655 aa17.31■□□□□ 0.36
CPSF7-204ENST00000413232 DEFB108AA8MXU0 73 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 H3BML4 177 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 SLITRK5O94991 958 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 GOSR1O95249 250 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 UTS2O95399 124 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 CRHP06850 196 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 NTSP30990 170 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 MAP3K8P41279 467 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 GRAMD1BQ3KR37 738 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 Q6ZSR9 355 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 GALNT10Q86SR1 603 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 CEP112Q8N8E3 955 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 HOXB13Q92826 284 aaPredicted RBP17.3■□□□□ 0.36
CPSF7-204ENST00000413232 KLHDC3Q9BQ90 382 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 TUBB1Q9H4B7 451 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 Q9N2J8 555 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 EQTNQ9NQ60 294 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 OXSMQ9NWU1 459 aa17.3■□□□□ 0.36
CPSF7-204ENST00000413232 NPIPB8E9PQR5 432 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 CTIFO43310 598 aaKnown RBP17.29■□□□□ 0.36
CPSF7-204ENST00000413232 SEC22BO75396 215 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 TNFRSF21O75509 655 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 UROSP10746 265 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 PRPH2P23942 346 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 CRHR1P34998 444 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 EEF1A1P68104 462 aaKnown RBP17.29■□□□□ 0.36
CPSF7-204ENST00000413232 HSPB3Q12988 150 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 GUSBP1Q15486 140 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 TMEM44Q2T9K0 475 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 EEF1A1P5Q5VTE0 462 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 IKBIPQ70UQ0 350 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 CHMP1BQ7LBR1 199 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 ZAR1Q86SH2 424 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 MEIOBQ8N635 442 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 KIF18AQ8NI77 898 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 DTNBP1Q96EV8 351 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 RNF122Q9H9V4 155 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 RRAGDQ9NQL2 400 aaPredicted RBP17.29■□□□□ 0.36
CPSF7-204ENST00000413232 SDHAF3Q9NRP4 125 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 NDRG3Q9UGV2 375 aa17.29■□□□□ 0.36
CPSF7-204ENST00000413232 WBP11Q9Y2W2 641 aaKnown RBP17.29■□□□□ 0.36
CPSF7-204ENST00000413232 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 IGLV3-32A0A0A0MS00 114 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 SMIM23A6NLE4 172 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 CASKO14936 926 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 AKAP10O43572 662 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 CRCPO75575 148 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 AQP8O94778 261 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 ANGPTL1O95841 491 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 CPA3P15088 417 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 FOSL1P15407 271 aa17.28■□□□□ 0.36
CPSF7-204ENST00000413232 CD79BP40259 229 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms