RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 FOXS1O43638 330 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 CBX7O95931 251 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 AK1P00568 194 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 NID1P14543 1247 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 GRK5P34947 590 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 CLK1P49759 484 aaKnown RBP18.72■□□□□ 0.59
USP39-204ENST00000409766 SYT14P1Q58G82 188 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 C17orf82Q86X59 251 aaPredicted RBP18.72■□□□□ 0.59
USP39-204ENST00000409766 VWA5B2Q8N398 1253 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 OR8D4Q8NGM9 314 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 WDR36Q8NI36 951 aaKnown RBP18.72■□□□□ 0.59
USP39-204ENST00000409766 PIGXQ8TBF5 258 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 SLC38A3Q99624 504 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 MGLLQ99685 303 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 DSN1Q9H410 356 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 TBC1D23Q9NUY8 699 aa18.72■□□□□ 0.59
USP39-204ENST00000409766 GABRA3P34903 492 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 UGT2B10P36537 528 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 LIMK1P53667 647 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 MLLT1Q03111 559 aaPredicted RBP18.71■□□□□ 0.59
USP39-204ENST00000409766 MAP4K2Q12851 820 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 DOC2BQ14184 412 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 MED22Q15528 200 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 SLC27A4Q6P1M0 643 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 TEX47Q8TBZ9 253 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 FNDC8Q8TC99 324 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 TMEM80Q96HE8 168 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 TSSK6Q9BXA6 273 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.71■□□□□ 0.59
USP39-204ENST00000409766 SLIRPQ9GZT3 109 aaKnown RBP18.71■□□□□ 0.59
USP39-204ENST00000409766 PEX12O00623 359 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 KLF4O43474 513 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 OR10H2O60403 315 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 RPLP0P05388 317 aaKnown RBP18.71■□□□□ 0.59
USP39-204ENST00000409766 HSMCR30P0CW71 290 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 S1PR1P21453 382 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 FPR3P25089 353 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 CSTF2P33240 577 aaKnown RBP eCLIP18.71■□□□□ 0.59
USP39-204ENST00000409766 SERPINB10P48595 397 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 STARD6P59095 220 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 C19orf48Q6RUI8 117 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 MBOAT2Q6ZWT7 520 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 OR52R1Q8NGF1 315 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 TMEM255BQ8WV15 326 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 PMM1Q92871 262 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 LRR1Q96L50 414 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 ZNF285Q96NJ3 590 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 RBCK1Q9BYM8 510 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 DCSTAMPQ9H295 470 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 ARMC7Q9H6L4 198 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 ZBTB20Q9HC78 741 aaPredicted RBP18.71■□□□□ 0.59
USP39-204ENST00000409766 PALMDQ9NP74 551 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 HCN3Q9P1Z3 774 aa18.71■□□□□ 0.59
USP39-204ENST00000409766 LAMA1P25391 3075 aa18.71■□□□□ 0.58
USP39-204ENST00000409766 GXYLT2A0PJZ3 443 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 CDHR4A6H8M9 788 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 J3QRK9 145 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 BRINP1O60477 761 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 NKX2-2O95096 273 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 RNH1P13489 461 aaKnown RBP18.7■□□□□ 0.58
USP39-204ENST00000409766 GABRA4P48169 554 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 TUBA1BP68363 451 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 POU6F2P78424 691 aaPredicted RBP18.7■□□□□ 0.58
USP39-204ENST00000409766 RPL6Q02878 288 aaKnown RBP18.7■□□□□ 0.58
USP39-204ENST00000409766 SNAPC1Q16533 368 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 MRPL2Q5T653 305 aaKnown RBP18.7■□□□□ 0.58
USP39-204ENST00000409766 RNLSQ5VYX0 342 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 FIGNL1Q6PIW4 674 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 TUBA1AQ71U36 451 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 ADCK1Q86TW2 530 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 NRMQ8IXM6 262 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 HLA-CQ95604 372 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 ZNF582Q96NG8 517 aaPredicted RBP18.7■□□□□ 0.58
USP39-204ENST00000409766 MIR1-1HGQ9H1L0 117 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 SLC7A7Q9UM01 511 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 LSM2Q9Y333 95 aaKnown RBP18.7■□□□□ 0.58
USP39-204ENST00000409766 PCDHGA3Q9Y5H0 932 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 ABCA7Q8IZY2 2146 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 CEP192Q8TEP8 1941 aa18.7■□□□□ 0.58
USP39-204ENST00000409766 NPIPA5A0A0B4J1W7 369 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 NPIPA7E9PJI5 369 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 TGFBR3LH3BV60 316 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 AQP9O43315 295 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 NPIPA8P0DM63 369 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 PRG2P13727 222 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 SKP1P63208 163 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 RHAGQ02094 409 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 SRSF5Q13243 272 aaKnown RBP18.69■□□□□ 0.58
USP39-204ENST00000409766 FAM53BQ14153 422 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 RANBP3LQ86VV4 465 aaPredicted RBP18.69■□□□□ 0.58
USP39-204ENST00000409766 POGLUT1Q8NBL1 392 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 C1orf216Q8TAB5 229 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 OR51E2Q9H255 320 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 AKIP1Q9NQ31 210 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 FBXO8Q9NRD0 319 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 PCDH15Q96QU1 1955 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 CLDN25C9JDP6 229 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 COQ9O75208 318 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 HTR2AP28223 471 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 IDUAP35475 653 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms