RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 DUSP19Q8WTR2 217 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 RTN4RQ9BZR6 473 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 LRTM1Q9HBL6 345 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 NGBQ9NPG2 151 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 CPSF2Q9P2I0 782 aaKnown RBP14.88□□□□□ -0.03
CHMP3-203ENST00000409225 UTS2RQ9UKP6 389 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 MCTS1Q9ULC4 181 aaKnown RBP14.88□□□□□ -0.03
CHMP3-203ENST00000409225 SLC12A4Q9UP95 1085 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 PCNX3Q9H6A9 2034 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 TCRBV9S1A1TA0A576 114 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 FAM159BA6NKW6 160 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 FADS1O60427 444 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 SYNGR4O95473 234 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 OPN1LWP04000 364 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 FESP07332 822 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 CTAGE8P0CG41 777 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 ZNF16P17020 682 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-203ENST00000409225 PTNP21246 168 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 IL32P24001 234 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 CCNG1P51959 295 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 NUDT6P53370 316 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 PSPHP78330 225 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 VLDLRP98155 873 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 RUNX1T1Q06455 604 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 BSPH1Q075Z2 132 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 GALNT1Q10472 559 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-203ENST00000409225 IFT88Q13099 833 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 TAB1Q15750 504 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 GRTP1Q5TC63 336 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 FIGNL1Q6PIW4 674 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.87□□□□□ -0.03
CHMP3-203ENST00000409225 MARCH3Q86UD3 253 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 CTAGE4Q8IX94 777 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 CENPLQ8N0S6 344 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-203ENST00000409225 SLC35F6Q8N357 371 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 ARIH2OSQ8N7S6 290 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 RHEBL1Q8TAI7 183 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 FAIM2Q9BWQ8 316 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 TRIM2Q9C040 744 aa14.87□□□□□ -0.03
CHMP3-203ENST00000409225 UBFD1O14562 309 aaKnown RBP14.86□□□□□ -0.03
CHMP3-203ENST00000409225 CXCL13O43927 109 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 NTN1O95631 604 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 ESRRBO95718 433 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 TUBBP07437 444 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 THBS2P35442 1172 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 ZNF155Q12901 538 aaPredicted RBP14.86□□□□□ -0.03
CHMP3-203ENST00000409225 NRF1Q16656 503 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 GLYR1Q49A26 553 aaPredicted RBP14.86□□□□□ -0.03
CHMP3-203ENST00000409225 MFSD12Q6NUT3 480 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 CLEC2AQ6UVW9 174 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 GALNT10Q86SR1 603 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 PPM1NQ8N819 430 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 CEP112Q8N8E3 955 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 OR10H5Q8NGA6 315 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 GLRX2Q9NS18 164 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 FBXO34Q9NWN3 711 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 CISD1Q9NZ45 108 aaKnown RBP14.86□□□□□ -0.03
CHMP3-203ENST00000409225 XPR1Q9UBH6 696 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 STOML1Q9UBI4 398 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 SNX12Q9UMY4 172 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 ABCG2Q9UNQ0 655 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 VDAC3Q9Y277 283 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 B3GALT5Q9Y2C3 310 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 TNPO3Q9Y5L0 923 aaKnown RBP14.86□□□□□ -0.03
CHMP3-203ENST00000409225 SNX8Q9Y5X2 465 aa14.86□□□□□ -0.03
CHMP3-203ENST00000409225 SVEP1Q4LDE5 3571 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 GCM2O75603 506 aaPredicted RBP14.85□□□□□ -0.03
CHMP3-203ENST00000409225 SRD5A1P18405 259 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 ADH6P28332 368 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 AGTR1P30556 359 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 C21orf58P58505 322 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 LOXL1Q08397 574 aaPredicted RBP14.85□□□□□ -0.03
CHMP3-203ENST00000409225 FAM83EQ2M2I3 478 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 CYB5R2Q6BCY4 276 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 DNAJC14Q6Y2X3 702 aaPredicted RBP14.85□□□□□ -0.03
CHMP3-203ENST00000409225 IL17RELQ6ZVW7 336 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 DTX2Q86UW9 622 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 ROBO4Q8WZ75 1007 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 HSD17B8Q92506 261 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 EXOSC8Q96B26 276 aaKnown RBP14.85□□□□□ -0.03
CHMP3-203ENST00000409225 ERP27Q96DN0 273 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 MTBPQ96DY7 904 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 ADGRG7Q96K78 797 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 HDHD5Q9BXW7 423 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 ELOVL6Q9H5J4 265 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 FARSBQ9NSD9 589 aaKnown RBP14.85□□□□□ -0.03
CHMP3-203ENST00000409225 SNX24Q9Y343 169 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 ALPK2Q86TB3 2170 aa14.85□□□□□ -0.03
CHMP3-203ENST00000409225 DPRXA6NFQ7 191 aa14.84□□□□□ -0.03
CHMP3-203ENST00000409225 TNFSF11O14788 317 aa14.84□□□□□ -0.03
CHMP3-203ENST00000409225 DLX3O60479 287 aa14.84□□□□□ -0.03
CHMP3-203ENST00000409225 RAMP1O60894 148 aa14.84□□□□□ -0.03
CHMP3-203ENST00000409225 RFX3P48380 749 aa14.84□□□□□ -0.03
CHMP3-203ENST00000409225 CLK3P49761 638 aaKnown RBP14.84□□□□□ -0.03
CHMP3-203ENST00000409225 CDH11P55287 796 aa14.84□□□□□ -0.03
CHMP3-203ENST00000409225 TRAF3Q13114 568 aa14.84□□□□□ -0.03
CHMP3-203ENST00000409225 TMEM44Q2T9K0 475 aa14.84□□□□□ -0.03
CHMP3-203ENST00000409225 C3orf62Q6ZUJ4 267 aa14.84□□□□□ -0.03
CHMP3-203ENST00000409225 WDR75Q8IWA0 830 aaKnown RBP14.84□□□□□ -0.03
CHMP3-203ENST00000409225 GABRG1Q8N1C3 465 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms