RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ARF3P61204 181 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-202ENST00000409031 ARF1P84077 181 aaKnown RBP16.71■□□□□ 0.27
SMPD4-202ENST00000409031 GNMTQ14749 295 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 LEXMQ3ZCV2 418 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 SOWAHCQ53LP3 525 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-202ENST00000409031 AADACL4Q5VUY2 407 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 SAXO2Q658L1 398 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 ABHD13Q7L211 337 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 NLRP8Q86W28 1048 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 METTL21AQ8WXB1 218 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 KLHL42Q9P2K6 505 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 GJD2Q9UKL4 321 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 OR6C65A6NJZ3 312 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 EDN1P05305 212 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 GPX2P18283 190 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 SSX2Q16385 188 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 DUSP7Q16829 419 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 GFOD2Q3B7J2 385 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 XAF1Q6GPH4 301 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 PODNL1Q6PEZ8 512 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 KCT2Q8NC54 265 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 PAQR8Q8TEZ7 354 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 SLC41A3Q96GZ6 507 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 RNF167Q9H6Y7 350 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 ZNF304Q9HCX3 659 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 ARAFP10398 606 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 PIPP12273 146 aaPredicted RBP16.7■□□□□ 0.26
SMPD4-202ENST00000409031 BPIP17213 487 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 RPL17P18621 184 aaKnown RBP16.7■□□□□ 0.26
SMPD4-202ENST00000409031 GDNFP39905 211 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 SLC1A3P43003 542 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 TAS2R38P59533 333 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 MAP4K2Q12851 820 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 UPP1Q16831 310 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 TPGS2Q68CL5 300 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 USP50Q70EL3 339 aaPredicted RBP16.7■□□□□ 0.26
SMPD4-202ENST00000409031 WDR20Q8TBZ3 569 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 F2RL3Q96RI0 385 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 CCDC86Q9H6F5 360 aaKnown RBP16.7■□□□□ 0.26
SMPD4-202ENST00000409031 IL20RAQ9UHF4 553 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 SNX11Q9Y5W9 270 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 C1orf226A1L170 272 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 RHPN2P1A8MT19 583 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 NCR1O76036 304 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 IRF4Q15306 451 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 TRIM46Q7Z4K8 759 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 CAMKVQ8NCB2 501 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 OR52E2Q8NGJ4 325 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 ELP5Q8TE02 316 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 SCAMP4Q969E2 229 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 TUBAL3A6NHL2 446 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 DCNP07585 359 aaKnown RBP16.7■□□□□ 0.26
SMPD4-202ENST00000409031 ERCC1P07992 297 aaPredicted RBP16.7■□□□□ 0.26
SMPD4-202ENST00000409031 ATP5A1P25705 553 aaKnown RBP16.7■□□□□ 0.26
SMPD4-202ENST00000409031 AKT2P31751 481 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 CD300CQ08708 224 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 MBTPS1Q14703 1052 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 TMEM130Q8N3G9 435 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 MFSD4AQ8N468 514 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 OR4K14Q8NGD5 310 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 TM9SF4Q92544 642 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 HRGP04196 525 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 DYRK1AQ13627 763 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 TSSK4Q6SA08 328 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 IL20RBQ6UXL0 311 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 NRROSQ86YC3 692 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 CMKLR1Q99788 373 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 PINK1Q9BXM7 581 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 V9GY05 133 aa16.7■□□□□ 0.26
SMPD4-202ENST00000409031 GKP32189 559 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 RNF144AP50876 292 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-202ENST00000409031 SORDQ00796 357 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 GLYATL1Q969I3 302 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 GFOD1Q9NXC2 390 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3DA0A087WVF3 549 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3IA0A087WXS9 549 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3EA0A087X179 549 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3KA0A087X1G2 549 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 MEGF11A6BM72 1044 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3FA6NER0 549 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3LB9A6J9 549 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 WASH3PC4AMC7 463 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 GPX5O75715 221 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 F2P00734 622 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3HP0C7X1 549 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 ADRB3P13945 408 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TUBG1P23258 451 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 NDUFS1P28331 727 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 HOXA11P31270 313 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-202ENST00000409031 GLP1RP43220 463 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 RBMS2Q15434 407 aaKnown RBP16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3GQ6DHY5 549 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3CQ6IPX1 549 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF585AQ6P3V2 769 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TMEM150AQ86TG1 271 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 SERPINA12Q8IW75 414 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TBC1D3Q8IZP1 549 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-202ENST00000409031 ZBTB44Q8NCP5 570 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 OR4F15Q8NGB8 312 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 SYNPRQ8TBG9 265 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms