RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PLCXD1Q9NUJ7 323 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 CENPVL1A0A0U1RR11 272 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 H3BN98 237 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 SEC14L2O76054 403 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 KCNK2O95069 426 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 OR5F1O95221 314 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 MSL3P1P0C860 447 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 ITIH1P19827 911 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 MMP11P24347 488 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 OR1D4P47884 311 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 HOXC5Q00444 222 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 HLA-BQ31612 363 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 GPR107Q5VW38 600 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 ZER1Q7Z7L7 766 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 RANBP3LQ86VV4 465 aaPredicted RBP17.61■□□□□ 0.41
USP39-202ENST00000409025 NUDT22Q9BRQ3 303 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 LHPPQ9H008 270 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 ZNF768Q9H5H4 540 aaKnown RBP17.61■□□□□ 0.41
USP39-202ENST00000409025 NECTIN3Q9NQS3 549 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 MMACHCQ9Y4U1 282 aa17.61■□□□□ 0.41
USP39-202ENST00000409025 A0A087WUU8 490 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 NPIPA5A0A0B4J1W7 369 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 NPIPA7E9PJI5 369 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 HRKO00198 91 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 PEX12O00623 359 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 AHCYL1O43865 530 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 SOX14O95416 240 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 NPIPA8P0DM63 369 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 ATXN8OSP0DMR3 200 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 GABRB1P18505 474 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 TNNI3P19429 210 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 GSTM3P21266 225 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 PCMT1P22061 227 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 DCKP27707 260 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 SLC5A2P31639 672 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 CNR2P34972 360 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 PGDP52209 483 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 ALDH6A1Q02252 535 aaKnown RBP17.6■□□□□ 0.41
USP39-202ENST00000409025 AP1ARQ63HQ0 302 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 ZNF730Q6ZMV8 503 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 RRM2BQ7LG56 351 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 C1orf210Q8IVY1 113 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 CCDC103Q8IW40 242 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 SVOPQ8N4V2 548 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 MUL1Q969V5 352 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 VSTM2LQ96N03 204 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 PTCHD1Q96NR3 888 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 OR1F2PQ96R84 312 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 LANCL2Q9NS86 450 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 DHCR7Q9UBM7 475 aaKnown RBP17.6■□□□□ 0.41
USP39-202ENST00000409025 KCNE5Q9UJ90 142 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 ERVK-19Q9WJR5 959 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 CPED1A4D0V7 1026 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 TOX3O15405 576 aaPredicted RBP17.6■□□□□ 0.41
USP39-202ENST00000409025 YKT6O15498 198 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 GUSBP08236 651 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 EMX1Q04741 257 aaPredicted RBP17.6■□□□□ 0.41
USP39-202ENST00000409025 FUT7Q11130 342 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 FLYWCH1Q4VC44 716 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 MRPL2Q5T653 305 aaKnown RBP17.6■□□□□ 0.41
USP39-202ENST00000409025 YOD1Q5VVQ6 348 aaPredicted RBP17.6■□□□□ 0.41
USP39-202ENST00000409025 SLX4IPQ5VYV7 408 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 GTF2IRD2BQ6EKJ0 949 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 TMEM71Q6P5X7 295 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 ZC3H14Q6PJT7 736 aaKnown RBP17.6■□□□□ 0.41
USP39-202ENST00000409025 PTCHD4Q6ZW05 846 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 AHSA2Q719I0 299 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 MED25Q71SY5 747 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 PRSS48Q7RTY5 328 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 GTF2IRD2Q86UP8 949 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 MAML2Q8IZL2 1156 aaPredicted RBP17.6■□□□□ 0.41
USP39-202ENST00000409025 GNPDA2Q8TDQ7 276 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 SLC41A3Q96GZ6 507 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 POLR2J2Q9GZM3 115 aaKnown RBP17.6■□□□□ 0.41
USP39-202ENST00000409025 FSCN3Q9NQT6 498 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 PCDHGA10Q9Y5H3 936 aa17.6■□□□□ 0.41
USP39-202ENST00000409025 CFIP05156 583 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 GCGRP47871 477 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 RFX3P48380 749 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 DECR1Q16698 335 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 GDF7Q7Z4P5 450 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 TOR1AIP2Q8NFQ8 470 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.59■□□□□ 0.41
USP39-202ENST00000409025 MPP4Q96JB8 637 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 RHNO1Q9BSD3 238 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 OR10A5Q9H207 317 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 EVA1AQ9H8M9 152 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 Q9N2J8 555 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 C11orf16Q9NQ32 467 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 PSORS1C1Q9UIG5 152 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 NTNG1Q9Y2I2 539 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 CACNA1EQ15878 2313 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 CDHR4A6H8M9 788 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 TTC36A6NLP5 189 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 ZNF99A8MXY4 864 aaPredicted RBP17.59■□□□□ 0.41
USP39-202ENST00000409025 DSCR3O14972 297 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 SIGLEC6O43699 453 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 HYAL3O43820 417 aaPredicted RBP17.59■□□□□ 0.41
USP39-202ENST00000409025 NOL3O60936 208 aaKnown RBP17.59■□□□□ 0.41
USP39-202ENST00000409025 MT-ND2P03891 347 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms