RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 DIMT1Q9UNQ2 313 aaKnown RBP14.9□□□□□ -0.02
CHRFAM7A-203ENST00000401522 KLHL20Q9Y2M5 609 aa14.9□□□□□ -0.02
CHRFAM7A-203ENST00000401522 CAB39Q9Y376 341 aaPredicted RBP14.9□□□□□ -0.02
CHRFAM7A-203ENST00000401522 HTR3EA5X5Y0 456 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 TNNI3P19429 210 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 RPS19P39019 145 aaKnown RBP14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 CASP3P42574 277 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 SSR2P43308 183 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 RAB28P51157 221 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 COPZ1P61923 177 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PIN1Q13526 163 aaPredicted RBP14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 KCNJ8Q15842 424 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 NDUFAF5Q5TEU4 345 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 BHLHB9Q6PI77 547 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 CREB3L4Q8TEY5 395 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 NRTNQ99748 197 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 RAB11FIP5Q9BXF6 653 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 POLR2J2Q9GZM3 115 aaKnown RBP14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 ZCCHC3Q9NUD5 404 aaKnown RBP14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 TVP23BQ9NYZ1 205 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 SSR3Q9UNL2 185 aa14.89□□□□□ -0.03
CHRFAM7A-203ENST00000401522 IRGMA1A4Y4 181 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 M0R3H8 397 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 FLRT2O43155 660 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 DYRK3O43781 588 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 TPST2O60704 377 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 RAB36O95755 333 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 GLB1P16278 677 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 GSTM3P21266 225 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 GRK6P43250 576 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 SZRD1Q7Z422 152 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 OR4K5Q8NGD3 323 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 SUN3Q8TAQ9 357 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 LCN9Q8WX39 176 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PRRC1Q96M27 445 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 WDFY2Q96P53 400 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PHOX2BQ99453 314 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 WFDC6Q9BQY6 131 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 NPAP1Q9NZP6 1156 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PCDHGA4Q9Y5G9 962 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 LY6G6EA0A0G2JKS1 128 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 LRIT2A6NDA9 550 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 CASC3O15234 703 aaKnown RBP14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 TLX2O43763 284 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PRKYO43930 277 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 HBQ1P09105 142 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 MAGP20916 626 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 MMP11P24347 488 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PKLRP30613 574 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 NCBP2P52298 156 aaKnown RBP eCLIP14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 RUNX1T1Q06455 604 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PRDX1Q06830 199 aaKnown RBP14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 GINS1Q14691 196 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 SYT14P1Q58G82 188 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 ENTPD8Q5MY95 495 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PRAMEF8Q5VWM4 474 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PRAMEF7Q5VXH5 474 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 C1orf94Q6P1W5 598 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 ZNF438Q7Z4V0 828 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 WDR53Q7Z5U6 358 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 ZER1Q7Z7L7 766 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 AMIGO1Q86WK6 493 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 IQCF1Q8N6M8 205 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 AMER3Q8N944 861 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 LINC01555Q8NAE3 123 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 OR6C4Q8NGE1 309 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 OR5D16Q8NGK9 328 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 OR2L8Q8NGY9 312 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 NR4A3Q92570 626 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 BBS4Q96RK4 519 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 BARHL1Q9BZE3 327 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 TWSG1Q9GZX9 223 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 OR6C2Q9NZP2 312 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 LRIT1Q9P2V4 623 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 RNF215Q9Y6U7 377 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 U3KQA8 63 aa14.88□□□□□ -0.03
CHRFAM7A-203ENST00000401522 IQCMA0A1B0GVH7 501 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 SLC35F4A4IF30 521 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 FAM221BA6H8Z2 402 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 LCMT2O60294 686 aaKnown RBP14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 LGI1O95970 557 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 SERPIND1P05546 499 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 CD59P13987 128 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PNLIPP16233 465 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 GIPRP48546 466 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 SMSP52788 366 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 CDK5Q00535 292 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 NR0B2Q15466 257 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 KLHL22Q53GT1 634 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 C3orf38Q5JPI3 329 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 TMPRSS11AQ6ZMR5 421 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 ADCK2Q7Z695 626 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 COMTD1Q86VU5 262 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 PHC2Q8IXK0 858 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 MORN4Q8NDC4 146 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 IL17RDQ8NFM7 739 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 OR4E2Q8NGC2 313 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 OR52I1Q8NGK6 324 aa14.87□□□□□ -0.03
CHRFAM7A-203ENST00000401522 UCN3Q969E3 161 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms