RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PCGF3Q3KNV8 242 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 MAMDC4Q6UXC1 1216 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM151BQ6UXP7 276 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 WNT8BQ93098 351 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 LRRC4CQ9HCJ2 640 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 SHPKQ9UHJ6 478 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 COQ4Q9Y3A0 265 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 KPTNQ9Y664 436 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 GHRHP01286 108 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 ITGB2P05107 769 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 HPNP05981 417 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 RPS17P08708 135 aaKnown RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC27A4Q6P1M0 643 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 CD200R1Q8TD46 325 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 NMES1Q9C002 83 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 OR51J1Q9H342 316 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 KCNK15Q9H427 330 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 HRASLSQ9HDD0 168 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 MRPS23Q9Y3D9 190 aaKnown RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 PTHP01270 115 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 HLA-AP01891 365 aaKnown RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 FOLR1P15328 257 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 TAS2R19P59542 299 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 SF3A2Q15428 464 aaKnown RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 ZFP62Q8NB50 900 aaPredicted RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 EAF2Q96CJ1 260 aaPredicted RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 A0A1B0GVT2 93 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 ACKR3P25106 362 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 ERASQ7Z444 233 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 TAS1R2Q8TE23 839 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 ASTN1O14525 1302 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 SIDT2Q8NBJ9 832 aaKnown RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 OR2D3Q8NGH3 330 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 RSG1Q9BU20 258 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 ANKRD19PQ9H560 264 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 POLDIP2Q9Y2S7 368 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 NEMP2A6NFY4 417 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 TLX2O43763 284 aaPredicted RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 GCH1P30793 250 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 CCR7P32248 378 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF280AP59817 542 aaPredicted RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 ALYREFQ86V81 257 aaKnown RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF410Q86VK4 478 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 TMEM183AQ8IXX5 376 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 HES4Q9HCC6 221 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 MRPL17Q9NRX2 175 aaKnown RBP8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 CD207Q9UJ71 328 aa8.19□□□□□ -1.1
CACNA1C-220ENST00000399655 STSP08842 583 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 AADACP22760 399 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 EEFSECP57772 596 aaKnown RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 OR10A3P58181 314 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 MAP1SQ66K74 1059 aaPredicted RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 LCLAT1Q6UWP7 414 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CCBE1Q6UXH8 406 aaPredicted RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ADAMTS19Q8TE59 1207 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CCM2Q9BSQ5 444 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 GPR62Q9BZJ7 368 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ASB7Q9H672 318 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 GNB4Q9HAV0 340 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 AGO1Q9UL18 857 aaKnown RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 DBX1A6NMT0 343 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 F5H6K3 240 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 RAD1O60671 282 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 BSGP35613 385 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 TGFBR3Q03167 851 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 KLRC3Q07444 240 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF546Q86UE3 836 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 C2orf73Q8N5S3 287 aaPredicted RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 KIAA1958Q8N8K9 716 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 OR13D1Q8NGV5 346 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 LIPHQ8WWY8 451 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF486Q96H40 463 aaPredicted RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 PTDSS2Q9BVG9 487 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 DOK5Q9P104 306 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 MAP2P11137 1827 aaKnown RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 AFDNP55196 1824 aaKnown RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 OR8U8P0C7N1 319 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CDKN1CP49918 316 aaPredicted RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CSNK1G2P78368 415 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF91Q05481 1191 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 IRF4Q15306 451 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 RBMS2Q15434 407 aaKnown RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 NT5DC1Q5TFE4 455 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 PYCR2Q96C36 320 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 OSGIN2Q9Y236 505 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CAMSAP1Q5T5Y3 1602 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 NPHS1O60500 1241 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC16A7O60669 478 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 TSPAN13O95857 204 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF33BQ06732 778 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CATSPERDQ86XM0 798 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 OR5K4A6NMS3 321 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC16A6O15403 523 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 OR5G3P0C626 314 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ARR3P36575 388 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 RFX5P48382 616 aaPredicted RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 SLX4IPQ5VYV7 408 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC47A2Q86VL8 602 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ASB11Q8WXH4 323 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 HSPBAP1Q96EW2 488 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms