RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TMEM81Q6P7N7 255 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 APOOLQ6UXV4 268 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NUP54Q7Z3B4 507 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MTERF4Q7Z6M4 381 aaKnown RBP11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SULF2Q8IWU5 870 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FBXW8Q8N3Y1 598 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ANKFN1Q8N957 763 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 OR4C3Q8NH37 302 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GRHL3Q8TE85 626 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 XAGE5Q8WWM1 108 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TAAR6Q96RI8 345 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZNF350Q9GZX5 532 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RUBCNLQ9H714 662 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NANOGQ9H9S0 305 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KCNE5Q9UJ90 142 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NTNG1Q9Y2I2 539 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FAM208BQ5VWN6 2430 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NCKAP5O14513 1909 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 COL6A6A6NMZ7 2263 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 LRRC3CA6NJW4 275 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DUXAA6NLW8 204 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 AIM2O14862 343 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FADS1O60427 444 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 WISP2O76076 250 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CBX6O95503 412 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 T-ENOLP0DO92 83 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SLC6A2P23975 617 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 IL12BP29460 328 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CASP3P42574 277 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CRATP43155 626 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DNASE1L1P49184 302 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DSTNP60981 165 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FOXO1Q12778 655 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KRT72Q14CN4 511 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 INPP5JQ15735 1006 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GRAMD1BQ3KR37 738 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MMEL1Q495T6 779 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RNFT1Q5M7Z0 435 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FNDC7Q5VTL7 733 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 AP1ARQ63HQ0 302 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SLC22A10Q63ZE4 541 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RPUSD3Q6P087 351 aaKnown RBP11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FRRS1Q6ZNA5 592 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PTOV1Q86YD1 416 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TEX19Q8NA77 164 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MAL2Q969L2 176 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ROPN1LQ96C74 230 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CMTM5Q96DZ9 223 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SECISBP2Q96T21 854 aaKnown RBP11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RSPO3Q9BXY4 272 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ANGPTL4Q9BY76 406 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SAP130Q9H0E3 1048 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SLC38A1Q9H2H9 487 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KAT8Q9H7Z6 458 aaKnown RBP11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GALNT9Q9HCQ5 603 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TIMMDC1Q9NPL8 285 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SACM1LQ9NTJ5 587 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GMPR2Q9P2T1 348 aaKnown RBP11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NINQ8N4C6 2090 aa11.37□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ANKRD33BA6NCL7 494 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 C2orf72A6NCS6 295 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PRAMEF25A6NGN4 478 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PEX1O43933 1283 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KIAA0513O60268 411 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TRIM3O75382 744 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SOX30O94993 753 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 OXSR1O95747 527 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 AK1P00568 194 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NPPAP01160 153 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GUSBP08236 651 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TFPTP0C1Z6 253 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ARAFP10398 606 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CD46P15529 392 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CNR1P21554 472 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PPIBP23284 216 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KRT20P35900 424 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RFC3P40938 356 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NUDT2P50583 147 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TXNL4AP83876 142 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PLAURQ03405 335 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FADDQ13158 208 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 EFR3AQ14156 821 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MAPK14Q16539 360 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TYW3Q6IPR3 259 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 HACD2Q6Y1H2 254 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NET1Q7Z628 596 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CALHM3Q86XJ0 350 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 POGLUT1Q8NBL1 392 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PCYOX1LQ8NBM8 494 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 OR2M7Q8NG81 312 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 OR8J3Q8NGG0 315 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TMEM125Q96AQ2 219 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZG16BQ96DA0 208 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 C5orf34Q96MH7 638 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FRMD6Q96NE9 622 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KLHDC3Q9BQ90 382 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 A4GALTQ9NPC4 353 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 EXD2Q9NVH0 621 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms