RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 EXPH5Q8NEV8 1989 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 BBIP1A8MTZ0 92 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 TSPAN2O60636 221 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 UGT2B11O75310 529 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 DCTN3O75935 186 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 KRT75O95678 551 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 POU6F2P78424 691 aaPredicted RBP23.31■■□□□ 1.32
U2AF1-203ENST00000398137 MMEL1Q495T6 779 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 RNFT1Q5M7Z0 435 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 COX20Q5RI15 118 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.31■■□□□ 1.32
U2AF1-203ENST00000398137 SLC25A25Q6KCM7 469 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 DLEU7Q6UYE1 221 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 SIAH3Q8IW03 269 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 ANKS4BQ8N8V4 417 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 BCAS4Q8TDM0 211 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 RAB8BQ92930 207 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 COL21A1Q96P44 957 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 BTBD2Q9BX70 525 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 TSPAN10Q9H1Z9 355 aaPredicted RBP23.31■■□□□ 1.32
U2AF1-203ENST00000398137 GIN1Q9NXP7 522 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 VAPAQ9P0L0 249 aa23.31■■□□□ 1.32
U2AF1-203ENST00000398137 ITPR2Q14571 2701 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 TRBV5-3A0A0A0MS03 114 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 G3V3Y1 287 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 MRASO14807 208 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 NME2P1O60361 137 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 IGKV1D-16P01601 117 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 COX4I1P13073 169 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 NME2P22392 152 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 PER3P56645 1201 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 CCNJQ5T5M9 372 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 FIGNL1Q6PIW4 674 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.3■■□□□ 1.32
U2AF1-203ENST00000398137 DIO2Q92813 273 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 HGDQ93099 445 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 SH2D2AQ9NP31 389 aa23.3■■□□□ 1.32
U2AF1-203ENST00000398137 CHCHD2Q9Y6H1 151 aaPredicted RBP23.3■■□□□ 1.32
U2AF1-203ENST00000398137 A0A0G2JMM0 328 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 A0A1W2PPB8 328 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 A0A1W2PRS3 328 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 OR6C70A6NIJ9 312 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 KIR3DP1A8MWS1 328 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 CLIC1O00299 241 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 TP53I11O14683 189 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 KCNK2O95069 426 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 IL33O95760 270 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 OR12D1P0DN82 309 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 CA7P43166 264 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 PRAMEF20Q5VT98 475 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 CHERPQ8IWX8 916 aaKnown RBP23.29■■□□□ 1.32
U2AF1-203ENST00000398137 TMEM178AQ8NBL3 297 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 RP9Q8TA86 221 aaKnown RBP23.29■■□□□ 1.32
U2AF1-203ENST00000398137 SPPL2AQ8TCT8 520 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 PAQR8Q8TEZ7 354 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 RCN3Q96D15 328 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 GPR137Q96N19 417 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 LRRC37BQ96QE4 947 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 SACM1LQ9NTJ5 587 aa23.29■■□□□ 1.32
U2AF1-203ENST00000398137 MRTO4Q9UKD2 239 aaKnown RBP23.29■■□□□ 1.32
U2AF1-203ENST00000398137 CNOT11Q9UKZ1 510 aaKnown RBP23.29■■□□□ 1.32
U2AF1-203ENST00000398137 KLF13Q9Y2Y9 288 aaPredicted RBP23.29■■□□□ 1.32
U2AF1-203ENST00000398137 TRGV8A0A0C4DH27 118 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 ABCB7O75027 752 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 P04436 131 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 CYP4B1P13584 511 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 ANXA11P50995 505 aaKnown RBP23.28■■□□□ 1.32
U2AF1-203ENST00000398137 MVDP53602 400 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 GPR85P60893 370 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 EFR3AQ14156 821 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 CAPRIN1Q14444 709 aaKnown RBP23.28■■□□□ 1.32
U2AF1-203ENST00000398137 TRMT5Q32P41 509 aaKnown RBP23.28■■□□□ 1.32
U2AF1-203ENST00000398137 COQ5Q5HYK3 327 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 DCST2Q5T1A1 773 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 SLC22A10Q63ZE4 541 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 BICRALQ6AI39 1079 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 NUP54Q7Z3B4 507 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 FBXW8Q8N3Y1 598 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 OR52N2Q8NGI0 321 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 XAGE5Q8WWM1 108 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 ITLN2Q8WWU7 325 aaPredicted RBP23.28■■□□□ 1.32
U2AF1-203ENST00000398137 CCDC120Q96HB5 630 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 NODALQ96S42 347 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 CPPED1Q9BRF8 314 aaPredicted RBP23.28■■□□□ 1.32
U2AF1-203ENST00000398137 DEPPQ9NTK1 212 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 FBXO34Q9NWN3 711 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 FLRT3Q9NZU0 649 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 ZNF835Q9Y2P0 537 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 PCDHGB3Q9Y5G1 929 aa23.28■■□□□ 1.32
U2AF1-203ENST00000398137 NOTCH2Q04721 2471 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 DUXAA6NLW8 204 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 HMGN4O00479 90 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 ZNHIT1O43257 154 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 ASNA1O43681 348 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 ICOSLGO75144 302 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 ETFAP13804 333 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 CRATP43155 626 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 PNLIPRP2P54317 469 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 PSMD4P55036 377 aaKnown RBP23.27■■□□□ 1.32
U2AF1-203ENST00000398137 STX5Q13190 355 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms