RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PCDH10Q9P2E7 1040 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 EIF5AP63241 154 aaKnown RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 ZNF517Q6ZMY9 492 aaPredicted RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 LANCL3Q6ZV70 420 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 AKAP1Q92667 903 aaKnown RBP eCLIP10.72□□□□□ -0.69
TTC28-201ENST00000397906 FIZ1Q96SL8 496 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 SLC22A31A6NKX4 558 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 FECHP22830 423 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 CLCN2P51788 898 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 ZNF610Q8N9Z0 462 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 OR2T4Q8NH00 348 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 CD300LFQ8TDQ1 290 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 SAMD8Q96LT4 415 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 ARMC1Q9NVT9 282 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 UBE2J1Q9Y385 318 aaPredicted RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 DDX60Q8IY21 1712 aaKnown RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 H7C417 338 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 PBX2P40425 430 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 FXYD4P59646 89 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 SYCE2Q6PIF2 218 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 CDHR3Q6ZTQ4 885 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 OR51T1Q8NGJ9 327 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 VIRMAQ69YN4 1812 aaKnown RBP10.71□□□□□ -0.69
TTC28-201ENST00000397906 AKR1C2P52895 323 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 CTC1Q2NKJ3 1217 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 TMEM151AQ8N4L1 468 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 AIG1Q9NVV5 245 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 KLHL9Q9P2J3 617 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 SCGB2A1O75556 95 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 EFR3AQ14156 821 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 RBM12BQ8IXT5 1001 aaKnown RBP10.71□□□□□ -0.69
TTC28-201ENST00000397906 OBP2BQ9NPH6 170 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 A0A1B0GVC2 190 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 CLDN8P56748 225 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 PSPHP78330 225 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 RGNQ15493 299 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 ABHD12BQ7Z5M8 362 aaPredicted RBP10.71□□□□□ -0.69
TTC28-201ENST00000397906 ENKD1Q9H0I2 346 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 TTLL8A6PVC2 850 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 TMX2-CTNND1H3BSU7 103 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 C1SP09871 688 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 PRKXP51817 358 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 FOXA1P55317 472 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 CSNK2A1P68400 391 aaPredicted RBP10.71□□□□□ -0.69
TTC28-201ENST00000397906 KCNAB2Q13303 367 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 ATP6AP1Q15904 470 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 NADSYN1Q6IA69 706 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 CHRM4P08173 479 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 KDELR2P33947 212 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 ISG20Q96AZ6 181 aaKnown RBP10.71□□□□□ -0.69
TTC28-201ENST00000397906 POLE4Q9NR33 117 aa10.71□□□□□ -0.69
TTC28-201ENST00000397906 PLCH1Q4KWH8 1693 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 TRAPPC13A5PLN9 417 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 C1orf105O95561 183 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 CST5P28325 142 aaPredicted RBP10.71□□□□□ -0.7
TTC28-201ENST00000397906 DAP3P51398 398 aaKnown RBP10.71□□□□□ -0.7
TTC28-201ENST00000397906 TEX26Q8N6G2 289 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 THRSPQ92748 146 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 GPR83Q9NYM4 423 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 DHCR7Q9UBM7 475 aaKnown RBP10.71□□□□□ -0.7
TTC28-201ENST00000397906 TYROBPO43914 113 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 PIN1Q13526 163 aaPredicted RBP10.71□□□□□ -0.7
TTC28-201ENST00000397906 PIANPQ8IYJ0 282 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 CENPSQ8N2Z9 138 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 ABCG2Q9UNQ0 655 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 SLC1A7O00341 560 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 TCN2P20062 427 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 LSSP48449 732 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 SFT2D3Q587I9 215 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 TMEM173Q86WV6 379 aaPredicted RBP10.71□□□□□ -0.7
TTC28-201ENST00000397906 NETO1Q8TDF5 533 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 TANKQ92844 425 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 B3GNT2Q9NY97 397 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 TMEM184BQ9Y519 407 aaPredicted RBP10.71□□□□□ -0.7
TTC28-201ENST00000397906 AHDC1Q5TGY3 1603 aaPredicted RBP10.71□□□□□ -0.7
TTC28-201ENST00000397906 MYH9P35579 1960 aaKnown RBP10.71□□□□□ -0.7
TTC28-201ENST00000397906 A0A1B0GV50 99 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 PCP4L1A6NKN8 68 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 FESP07332 822 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 STSP08842 583 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 ZNF12P17014 697 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 MFSD13AQ14CX5 517 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 RPE65Q16518 533 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 MYO9BQ13459 2157 aa10.71□□□□□ -0.7
TTC28-201ENST00000397906 GSTM2P28161 218 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 IRS1P35568 1242 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 ETV5P41161 510 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 CRISP1P54107 249 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 OR1D5P58170 312 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 SIRPAP78324 504 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 MELKQ14680 651 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 OR9Q2Q8NGE9 314 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 UTP23Q9BRU9 249 aaKnown RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 RGPD1P0DJD0 1748 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 DDCP20711 480 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 ISCA2Q86U28 154 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 SLC22A16Q86VW1 577 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 RSC1A1Q92681 617 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 ZUFSPQ96AP4 578 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms