RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PISDQ9UG56 409 aa17.99■□□□□ 0.47
PDLIM2-204ENST00000397760 MKL2Q9ULH7 1088 aa17.99■□□□□ 0.47
PDLIM2-204ENST00000397760 ERGIC3Q9Y282 383 aa17.99■□□□□ 0.47
PDLIM2-204ENST00000397760 PCDHGA10Q9Y5H3 936 aa17.99■□□□□ 0.47
PDLIM2-204ENST00000397760 B3GALT1Q9Y5Z6 326 aa17.99■□□□□ 0.47
PDLIM2-204ENST00000397760 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 IGKV3D-11A0A0A0MRZ8 115 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 SPAARA0A1B0GVQ0 90 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 A8MVJ9 347 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 CLDN25C9JDP6 229 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 HMGN4O00479 90 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 IFI6P09912 130 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 ZGLP1P0C6A0 271 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 OR12D1P0DN82 309 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 MAGEA8P43361 318 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 KHKP50053 298 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 AQP6Q13520 282 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 SPCS2Q15005 226 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 LCN10Q6JVE6 187 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 GALNT5Q7Z7M9 940 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 SLC15A4Q8N697 577 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 OR5D16Q8NGK9 328 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 RAB8BQ92930 207 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 GIMAP5Q96F15 307 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 LRFN5Q96NI6 719 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 DOHHQ9BU89 302 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 ADAP2Q9NPF8 381 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 THUMPD1Q9NXG2 353 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 SCN2AQ99250 2005 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 CCDC187A0A096LP49 1063 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 SUV39H1O43463 412 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 RGS10O43665 173 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 NME6O75414 186 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 SULT1C4O75897 302 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 KLK3P07288 261 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 FTH1P19P0C7X4 201 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 ARAFP10398 606 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 TNNI3P19429 210 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 SERPINB10P48595 397 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 ST13P50502 369 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 ANXA11P50995 505 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 EFNA3P52797 238 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 KCNJ10P78508 379 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 CDK6Q00534 326 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 TEKQ02763 1124 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 KCNC4Q03721 635 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 SCARB2Q14108 478 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 ZNF630Q2M218 657 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 MLIPQ5VWP3 458 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 SHISA6Q6ZSJ9 500 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 C7orf57Q8NEG2 295 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 NFKBIDQ8NI38 313 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 XAGE5Q8WWM1 108 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 FCGR1BQ92637 280 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 OTUB1Q96FW1 271 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 HRASLS5Q96KN8 279 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 TAAR9Q96RI9 348 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 BARD1Q99728 777 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 PNO1Q9NRX1 252 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 C14orf105Q9NVL8 296 aa17.98■□□□□ 0.47
PDLIM2-204ENST00000397760 PMS2P1A4D2B8 440 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 hCG_2039718K7EN88 272 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 PLD2O14939 933 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 ADAMDEC1O15204 470 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 XPNPEP2O43895 674 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 DKK1O94907 266 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 RECKO95980 971 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 CSRP1P21291 193 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 GALNSP34059 522 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 EEF1A2Q05639 463 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 PIGFQ07326 219 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 NPRL3Q12980 569 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 EIF3IQ13347 325 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 ZNF267Q14586 743 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 EXOSC7Q15024 291 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 NSDHLQ15738 373 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 RGS21Q2M5E4 152 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 MFSD12Q6NUT3 480 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 VTCN1Q7Z7D3 282 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 ATG16L2Q8NAA4 619 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 PLPP5Q8NEB5 264 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 OR10Q1Q8NGQ4 319 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 SH3YL1Q96HL8 342 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 SIGLEC11Q96RL6 698 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 ZPBPQ9BS86 351 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 ACTRT3Q9BYD9 372 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 AKIRIN1Q9H9L7 192 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 A4GALTQ9NPC4 353 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 ERVK-18Q9QC07 812 aa17.97■□□□□ 0.47
PDLIM2-204ENST00000397760 TCRBV16S1A1N1A0A5B0 115 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 MAGEB3O15480 346 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 CBX7O95931 251 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 HNRNPCP07910 306 aaKnown RBP eCLIP17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 S1PR1P21453 382 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 PGDP52209 483 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 FOXL2P58012 376 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 DGUOKQ16854 277 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 MINDY2Q8NBR6 621 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 OR52R1Q8NGF1 315 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 PLCXD1Q9NUJ7 323 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms