RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 WISP3O95389 354 aaPredicted RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 CH25HO95992 272 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 ADORA3P0DMS8 318 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 TNFRSF1BP20333 461 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 DLSTP36957 453 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PIN1Q13526 163 aaPredicted RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 DGUOKQ16854 277 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 SPRED3Q2MJR0 410 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 RBM48Q5RL73 367 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PRAMEF8Q5VWM4 474 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PRAMEF7Q5VXH5 474 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 MEDAGQ5VYS4 303 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 ALKBH2Q6NS38 261 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 ULK3Q6PHR2 472 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 MORN4Q8NDC4 146 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 HSPBAP1Q96EW2 488 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 TAS2R10Q9NYW0 307 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 BOKQ9UMX3 212 aaPredicted RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 FARSAQ9Y285 508 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 H0YAE9 185 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 H3BNX3 289 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 HRO43593 1189 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 ZGLP1P0C6A0 271 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PRR35P0CG20 571 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PRKAR1AP10644 381 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 CBLP22681 906 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 MYL9P24844 172 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 YBX1P67809 324 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 SF3A2Q15428 464 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PGM2L1Q6PCE3 622 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 AMER2Q8N7J2 671 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 C9orf43Q8TAL5 461 aaPredicted RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 FCGR1BQ92637 280 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 SFXN2Q96NB2 322 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 FEVQ99581 238 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 TESQ9UGI8 421 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 TCRBV3S1A0A5B6 114 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 EME2A4GXA9 379 aaPredicted RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 D6RAR5 112 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 ZNF264O43296 627 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 WNT1P04628 370 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PTNP21246 168 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 CASP6P55212 293 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 CDH11P55287 796 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 KCNAB2Q13303 367 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 TRMT12Q53H54 448 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 FCRL6Q6DN72 434 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 CXXC5Q7LFL8 322 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 SLC16A11Q8NCK7 471 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 NMD3Q96D46 503 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 ABCD2Q9UBJ2 740 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 A0A087WV62 115 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 H0YJX3 145 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 LYNP07948 512 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 FOLR1P15328 257 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 PSMA1P25786 263 aaKnown RBP7.71□□□□□ -1.17
PTPRD-204ENST00000397606 GCGRP47871 477 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 DEFA1P59665 94 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 DEFA3P59666 94 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 DLEU7Q6UYE1 221 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 MED25Q71SY5 747 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 CPEB2Q7Z5Q1 589 aaKnown RBP7.71□□□□□ -1.17
PTPRD-204ENST00000397606 RPS19BP1Q86WX3 136 aaKnown RBP7.71□□□□□ -1.17
PTPRD-204ENST00000397606 VRK2Q86Y07 508 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 PDSS2Q86YH6 399 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 NRMQ8IXM6 262 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 CHST8Q9H2A9 424 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 ASB6Q9NWX5 421 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 SLC7A7Q9UM01 511 aa7.71□□□□□ -1.17
PTPRD-204ENST00000397606 GXYLT2A0PJZ3 443 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 OR6C76A6NM76 312 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 STMND1H3BQB6 276 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SYT5O00445 386 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 JRKO75564 520 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 OR5F1O95221 314 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 TACSTD2P09758 323 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 HOXA6P31267 233 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 STAT5AP42229 794 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SLC9A3P48764 834 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 CRISP1P54107 249 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SF3B4Q15427 424 aaKnown RBP eCLIP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SLC36A3Q495N2 470 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 WBP2NLQ6ICG8 309 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 TCEAL6Q6IPX3 200 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 FRRS1Q6ZNA5 592 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 PRSS42Q7Z5A4 293 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 LAPTM4BQ86VI4 370 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 UBQLNLQ8IYU4 475 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 NLGN4XQ8N0W4 816 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 GHDCQ8N2G8 530 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 TCEANCQ8N8B7 351 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 NLGN4YQ8NFZ3 816 aaPredicted RBP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 OR1L3Q8NH93 324 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF671Q8TAW3 534 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SLC2A12Q8TD20 617 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 TCEAL3Q969E4 200 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 C1GALT1C1Q96EU7 318 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SCARF2Q96GP6 870 aaPredicted RBP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 ERMAPQ96PL5 475 aaPredicted RBP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 ITPAQ9BY32 194 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms