RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CYC1P08574 325 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 HTR1AP08908 422 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 SLC35E2P0CK97 266 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 NUP107P57740 925 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 CDK5R2Q13319 367 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 PMS2P3Q13401 168 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 NSDHLQ15738 373 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 TBC1D25Q3MII6 688 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 SPDYE7PQ495Y7 208 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 XAF1Q6GPH4 301 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 DTX1Q86Y01 620 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 CCDC116Q8IYX3 515 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 ATG16L2Q8NAA4 619 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 OR2Y1Q8NGV0 311 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 GIPC3Q8TF64 312 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 METTL21AQ8WXB1 218 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 NKD1Q969G9 470 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 GPR87Q9BY21 358 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 FAM117AQ9C073 453 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 RIBC2Q9H4K1 309 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 EXD2Q9NVH0 621 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 P2RX2Q9UBL9 471 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 FARSAQ9Y285 508 aaKnown RBP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 TESMINQ9Y4I5 508 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 CLDN16Q9Y5I7 305 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 IGKV3D-11A0A0A0MRZ8 115 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 LOC101059948A0A1B0GTJ6 334 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 CCDC160A6NGH7 325 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 TRIM64BA6NI03 449 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 ENO4A6NNW6 628 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 C5orf58C9J3I9 102 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 ALOX12BO75342 701 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 KLF7O75840 302 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-207ENST00000397200 IFNA16P05015 189 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 ADRB1P08588 477 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 RHCEP18577 417 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 DCKP27707 260 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 OR1E2P47887 323 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 KHKP50053 298 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 EFNA3P52797 238 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 DUSP2Q05923 314 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 NPRL3Q12980 569 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 RAB39AQ14964 217 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 RPS26P11Q5JNZ5 115 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-207ENST00000397200 FAAH2Q6GMR7 532 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 TSPYL5Q86VY4 417 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-207ENST00000397200 GPR32P1Q8NGA4 272 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 OR10G2Q8NGC3 310 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 KIAA1143Q96AT1 154 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-207ENST00000397200 RBM18Q96H35 190 aaKnown RBP13.85□□□□□ -0.19
CAPN3-207ENST00000397200 HRASLS5Q96KN8 279 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 DHRS1Q96LJ7 313 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 DGAT2Q96PD7 388 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 APOL4Q9BPW4 351 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 PELOQ9BRX2 385 aaKnown RBP13.85□□□□□ -0.19
CAPN3-207ENST00000397200 RSPO3Q9BXY4 272 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-207ENST00000397200 BCL2L10Q9HD36 194 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 ZCCHC3Q9NUD5 404 aaKnown RBP13.85□□□□□ -0.19
CAPN3-207ENST00000397200 TCFL5Q9UL49 500 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 GPC6Q9Y625 555 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-207ENST00000397200 AHCTF1Q8WYP5 2266 aa13.85□□□□□ -0.19
CAPN3-207ENST00000397200 TCRBV16S1A1N1A0A5B0 115 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 IFNW1P05000 195 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 ATP1B1P05026 303 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 ANXA8P13928 327 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 GPC1P35052 558 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 STT3AP46977 705 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 KCNJ5P48544 419 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 SPIBQ01892 262 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 TP53BP2Q13625 1128 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 DUSP7Q16829 419 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 MICAQ29983 383 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 FAM69BQ5VUD6 431 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 PRAMEF8Q5VWM4 474 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 PRAMEF7Q5VXH5 474 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 BHLHB9Q6PI77 547 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 CCDC71Q8IV32 467 aaPredicted RBP13.84□□□□□ -0.19
CAPN3-207ENST00000397200 TMEM151BQ8IW70 566 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 SPARTQ8N0X7 666 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 SMYD1Q8NB12 490 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 OR56A1Q8NGH5 318 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 OR13F1Q8NGS4 319 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 RASSF5Q8WWW0 418 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 ISOC1Q96CN7 298 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 OR51I1Q9H343 314 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 ACER3Q9NUN7 267 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 WDR70Q9NW82 654 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 C19orf25Q9UFG5 118 aaPredicted RBP13.84□□□□□ -0.19
CAPN3-207ENST00000397200 POFUT2Q9Y2G5 429 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 PCDHGB1Q9Y5G3 927 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 GMPPBQ9Y5P6 360 aa13.84□□□□□ -0.19
CAPN3-207ENST00000397200 TERTO14746 1132 aaKnown RBP13.83□□□□□ -0.2
CAPN3-207ENST00000397200 SEC14L2O76054 403 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 IGHEP01854 428 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 UMODP07911 640 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 NT5EP21589 574 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 CBLP22681 906 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 PCSK6P29122 969 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 ANXA11P50995 505 aaKnown RBP13.83□□□□□ -0.2
CAPN3-207ENST00000397200 CDH12P55289 794 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms