RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 FESP07332 822 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 CCNG1P51959 295 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 TRA2BP62995 288 aaKnown RBP13.36□□□□□ -0.27
SEC13-206ENST00000397102 GALNT1Q10472 559 aaPredicted RBP13.36□□□□□ -0.27
SEC13-206ENST00000397102 IFT88Q13099 833 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 ACAP2Q15057 778 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 NRF1Q16656 503 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 FAM83EQ2M2I3 478 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 TMEM44Q2T9K0 475 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 TMEM249Q2WGJ8 235 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 PGGHGQ32M88 737 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 CCDC91Q7Z6B0 441 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 CCDC116Q8IYX3 515 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 KAT2AQ92830 837 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 KCNK17Q96T54 332 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 TRAF4Q9BUZ4 470 aaPredicted RBP13.36□□□□□ -0.27
SEC13-206ENST00000397102 HDHD5Q9BXW7 423 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 RTN4RQ9BZR6 473 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 GRIP2Q9C0E4 1043 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 ALG2Q9H553 416 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 MCTS1Q9ULC4 181 aaKnown RBP13.36□□□□□ -0.27
SEC13-206ENST00000397102 SLC12A4Q9UP95 1085 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.35□□□□□ -0.272e-7■□□□□ 11.3
SEC13-206ENST00000397102 IGHV4-30-2A0A087WSY4 118 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 EIF3HO15372 352 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEC13-206ENST00000397102 GSTA2P09210 222 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 CTAGE8P0CG41 777 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 PSG6Q00889 435 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 IRF9Q00978 393 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 TRAF3Q13114 568 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 GGTA1PQ4G0N0 100 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 C3orf62Q6ZUJ4 267 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 CTAGE4Q8IX94 777 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 PPM1NQ8N819 430 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 KBTBD8Q8NFY9 601 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 OR9A2Q8NGT5 310 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 OR10D3Q8NH80 312 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 DUSP19Q8WTR2 217 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 TNFRSF13CQ96RJ3 184 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 ELOVL6Q9H5J4 265 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 FAM120CQ9NX05 1096 aaKnown RBP13.35□□□□□ -0.27
SEC13-206ENST00000397102 TAS2R9Q9NYW1 312 aa13.35□□□□□ -0.27
SEC13-206ENST00000397102 CPSF2Q9P2I0 782 aaKnown RBP13.35□□□□□ -0.27
SEC13-206ENST00000397102 SSX4O60224 188 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 DLX3O60479 287 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 PLOD3O60568 738 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 GCM2O75603 506 aaPredicted RBP13.34□□□□□ -0.27
SEC13-206ENST00000397102 SYNGR4O95473 234 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 CD8AP01732 235 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 TUBBP07437 444 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 TCP1P17987 556 aaKnown RBP13.34□□□□□ -0.27
SEC13-206ENST00000397102 ADH6P28332 368 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 AGTR1P30556 359 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 CLK3P49761 638 aaKnown RBP13.34□□□□□ -0.27
SEC13-206ENST00000397102 CASP9P55211 416 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 VLDLRP98155 873 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 LOXL1Q08397 574 aaPredicted RBP13.34□□□□□ -0.27
SEC13-206ENST00000397102 TAB1Q15750 504 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 SGO1Q5FBB7 561 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 LGSNQ5TDP6 509 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 FIGNL1Q6PIW4 674 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 DTX2Q86UW9 622 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 EXOC3L1Q86VI1 746 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 SAMD14Q8IZD0 417 aaPredicted RBP13.34□□□□□ -0.27
SEC13-206ENST00000397102 OR10H5Q8NGA6 315 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 MTBPQ96DY7 904 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 ADGRG7Q96K78 797 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 TRIM2Q9C040 744 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 SHARPINQ9H0F6 387 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 C12orf49Q9H741 205 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 BRF2Q9HAW0 419 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 FLRT3Q9NZU0 649 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 XPR1Q9UBH6 696 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 SNX24Q9Y343 169 aa13.34□□□□□ -0.27
SEC13-206ENST00000397102 IGLV3-32A0A0A0MS00 114 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 SHISA8B8ZZ34 492 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 ESRRBO95718 433 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 C2P06681 752 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 ZNF17P17021 662 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 DSCR9P59020 149 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 ZNF155Q12901 538 aaPredicted RBP13.33□□□□□ -0.28
SEC13-206ENST00000397102 CYP27C1Q4G0S4 372 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 SH2D4BQ5SQS7 431 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 MFSD12Q6NUT3 480 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 KLC3Q6P597 504 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 GALNT10Q86SR1 603 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 MARCH3Q86UD3 253 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 WDR75Q8IWA0 830 aaKnown RBP13.33□□□□□ -0.28
SEC13-206ENST00000397102 GABRG1Q8N1C3 465 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 C1orf52Q8N6N3 182 aaKnown RBP13.33□□□□□ -0.28
SEC13-206ENST00000397102 PTGR2Q8N8N7 351 aaPredicted RBP13.33□□□□□ -0.28
SEC13-206ENST00000397102 OR7G2Q8NG99 324 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 HSD17B8Q92506 261 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 FARSBQ9NSD9 589 aaKnown RBP13.33□□□□□ -0.28
SEC13-206ENST00000397102 FAIMQ9NVQ4 179 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 FBXO34Q9NWN3 711 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 NMRK1Q9NWW6 199 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 SENP1Q9P0U3 644 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 PCTPQ9UKL6 214 aa13.33□□□□□ -0.28
SEC13-206ENST00000397102 CADP27708 2225 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms