RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 OR4Q3Q8NH05 313 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 SPRYD4Q8WW59 207 aaPredicted RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 GFM1Q96RP9 751 aaKnown RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 WACQ9BTA9 647 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 GHITMQ9H3K2 345 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 TBC1D17Q9HA65 648 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 SZT2Q5T011 3432 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 A0A0A6YYD5 115 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 A0A0A6YYJ9 748 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 PRR23AA6NEV1 266 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 OTOL1A6NHN0 477 aaPredicted RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 GTPBP1O00178 669 aaKnown RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 FABP7O15540 132 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 POP7O75817 140 aaKnown RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 TFPIP10646 304 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 DRD2P14416 443 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 FCARP24071 287 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 FPR3P25089 353 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 TRIM23P36406 574 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 NNMTP40261 264 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 STAT5AP42229 794 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 PER3P56645 1201 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 HYAL1Q12794 435 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 INSL4Q14641 139 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 TRAM2Q15035 370 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 GAB4Q2WGN9 574 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 HACD4Q5VWC8 232 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 ZNF57Q68EA5 555 aaPredicted RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 RAET1GQ6H3X3 334 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 ANKRD54Q6NXT1 300 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 C11orf96Q7Z7L8 435 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 C11orf74Q86VG3 221 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 C12orf40Q86WS4 652 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 OR4M2Q8NGB6 313 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 SFXN5Q8TD22 340 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 WFIKKN2Q8TEU8 576 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 SORCS1Q8WY21 1168 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 RGMAQ96B86 450 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 EMC7Q9NPA0 242 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 ZFP64Q9NPA5 681 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 ZCCHC3Q9NUD5 404 aaKnown RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 EXTL2Q9UBQ6 330 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 ITM2BQ9Y287 266 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 NCKAP1Q9Y2A7 1128 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 REV3LO60673 3130 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 TEX51A0A1B0GUA7 166 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 C2orf92A0A1B0GVN3 265 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 ZSCAN5BA6NJL1 495 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 LANCL1O43813 399 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 RBMS1P29558 406 aaKnown RBP12.46□□□□□ -0.41
TRIM40-207ENST00000396581 THBS2P35442 1172 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 WDR45BQ5MNZ6 344 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 GET4Q7L5D6 327 aaPredicted RBP12.46□□□□□ -0.41
TRIM40-207ENST00000396581 OLIG3Q7RTU3 272 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 DCUN1D3Q8IWE4 304 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 CYB5D2Q8WUJ1 264 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 OSTF1Q92882 214 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 RFT1Q96AA3 541 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 MENTQ9BUN1 341 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 RANBP3Q9H6Z4 567 aaPredicted RBP12.46□□□□□ -0.41
TRIM40-207ENST00000396581 TRPC4Q9UBN4 977 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 KCNN3Q9UGI6 736 aa12.46□□□□□ -0.41
TRIM40-207ENST00000396581 CD8B2A6NJW9 211 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 B8ZZF3 427 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 LINC01565O15544 149 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 NDUFS4O43181 175 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 RNF13O43567 381 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 RGS9O75916 674 aaPredicted RBP12.46□□□□□ -0.42
TRIM40-207ENST00000396581 SLC22A5O76082 557 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 PAHP00439 452 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 CD8BP10966 210 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 UQCRC1P31930 480 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 ANXA11P50995 505 aaKnown RBP12.46□□□□□ -0.42
TRIM40-207ENST00000396581 CCR8P51685 355 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 TAS2R41P59536 307 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 CSTF1Q05048 431 aaKnown RBP12.46□□□□□ -0.42
TRIM40-207ENST00000396581 ST3GAL3Q11203 375 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 PDGFRLQ15198 375 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 FCN2Q15485 313 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 FAM205BPQ63HN1 556 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 BHLHB9Q6PI77 547 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 SMARCD3Q6STE5 483 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 TEX261Q6UWH6 196 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 OAFQ86UD1 273 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 OR5AR1Q8NGP9 310 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 MAP6Q96JE9 813 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 THAP7Q9BT49 309 aaPredicted RBP12.46□□□□□ -0.42
TRIM40-207ENST00000396581 KCNN2Q9H2S1 579 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 SLC35C2Q9NQQ7 365 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 IMP3Q9NV31 184 aaKnown RBP12.46□□□□□ -0.42
TRIM40-207ENST00000396581 CUEDC1Q9NWM3 386 aaPredicted RBP12.46□□□□□ -0.42
TRIM40-207ENST00000396581 SLCO1C1Q9NYB5 712 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 CNIH4Q9P003 139 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 TAC3Q9UHF0 121 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 TEKT2Q9UIF3 430 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 ASF1AQ9Y294 204 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 U3KQ87 197 aa12.46□□□□□ -0.42
TRIM40-207ENST00000396581 K7ESM1 405 aa12.45□□□□□ -0.42
TRIM40-207ENST00000396581 AGRPO00253 132 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms