RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ZNF888P0CJ79 500 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PTNP21246 168 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CNR2P34972 360 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 APLNRP35414 380 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ARSDP51689 593 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 MRPS10P82664 201 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 C1orf61Q13536 156 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PNCKQ6P2M8 343 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SLC5A8Q8N695 610 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 TBC1D15Q8TC07 691 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CD200R1Q8TD46 325 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 FIZ1Q96SL8 496 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 DCAF13Q9NV06 445 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ERVK13-1Q9NX77 482 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PTGDR2Q9Y5Y4 395 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PIAS3Q9Y6X2 628 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 HMX3A6NHT5 357 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 C1orf105O95561 183 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 MSX1P28360 303 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 OTX2P32243 289 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 MAGEA3P43357 314 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 RAB40BQ12829 278 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 S100A7AQ86SG5 101 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CLECL1Q8IZS7 167 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PAPD5Q8NDF8 572 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 OR13J1Q8NGT2 312 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 C22orf15Q8WYQ4 148 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ALG8Q9BVK2 526 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CPNE5Q9HCH3 593 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SLC6A5Q9Y345 797 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SLC35F4A4IF30 521 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CER1O95813 267 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 IFNA4P05014 189 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 AKR1C4P17516 323 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 NR0B1P51843 470 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CXCR4P61073 352 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CAMK2DQ13557 499 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SLC35G1Q2M3R5 365 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CSNK1G1Q9HCP0 422 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SLC22A7Q9Y694 548 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 C17orf113A0A1B0GUU1 675 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 G3V2L1 256 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SSX5O60225 188 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CSNK2A1P68400 391 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 USF2Q15853 346 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 NTRK2Q16620 822 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CMPK2Q5EBM0 449 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 USP53Q70EK8 1073 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SGPP2Q8IWX5 399 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ACOT4Q8N9L9 421 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 NETO1Q8TDF5 533 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SORCS1Q8WY21 1168 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 GCDHQ92947 438 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 NAT6Q93015 286 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF578Q96N58 590 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SULT4A1Q9BR01 284 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 RBM24Q9BX46 236 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ANKRD60Q9BZ19 345 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ATPIF1Q9UII2 106 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 NAALAD2Q9Y3Q0 740 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 MBLAC1A4D2B0 266 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CYB5BO43169 146 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 IL1RNP18510 177 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PRSS3P35030 304 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CSNK1DP48730 415 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 BTBD16Q32M84 506 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 FAM69AQ5T7M9 428 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ENPP6Q6UWR7 440 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CDHR3Q6ZTQ4 885 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 DPPA4Q7L190 304 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 TRAPPC6BQ86SZ2 158 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 RCBTB1Q8NDN9 531 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 TRMT10AQ8TBZ6 339 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 RNF128Q8TEB7 428 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ABHD5Q8WTS1 349 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 DTD2Q96FN9 168 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 IL17FQ96PD4 163 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CRB3Q9BUF7 120 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 FUNDC2Q9BWH2 189 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PLEKHA3Q9HB20 300 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 DMRT3Q9NQL9 472 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 MCTS1Q9ULC4 181 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CYBAP13498 195 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 FOLR3P41439 243 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 PITX1P78337 314 aaPredicted RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 Q6ZSR6 202 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 PHC2Q8IXK0 858 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 OR4K13Q8NH42 304 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 GPR148Q8TDV2 347 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 CRYGNQ8WXF5 182 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 ASB12Q8WXK4 309 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 CIDECQ96AQ7 238 aaPredicted RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 APMAPQ9HDC9 416 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 NENFQ9UMX5 172 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 ADAMTS5Q9UNA0 930 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF337Q9Y3M9 751 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 HHLA1C9JL84 531 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 PAHP00439 452 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 FNTBP49356 437 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms