RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 RNF138Q8WVD3 245 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 GNRHR2Q96P88 292 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 OR7D2Q96RA2 312 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 STACQ99469 402 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 SLC35A5Q9BS91 424 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 BTBD2Q9BX70 525 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 OSBPL11Q9BXB4 747 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 DUSP22Q9NRW4 184 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 SLC6A13Q9NSD5 602 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 GIN1Q9NXP7 522 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 KLRF1Q9NZS2 232 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 ARMCX1Q9P291 453 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 MRTO4Q9UKD2 239 aaKnown RBP15.14■□□□□ 0.01
CXCL1-201ENST00000395761 BOKQ9UMX3 212 aaPredicted RBP15.14■□□□□ 0.01
CXCL1-201ENST00000395761 SVILO95425 2214 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 C17orf51A8MQB3 221 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 ADAM10O14672 748 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 FADS1O60427 444 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 CDC40O60508 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
CXCL1-201ENST00000395761 UTS2O95399 124 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 SNRPB2P08579 225 aaKnown RBP15.13■□□□□ 0.01
CXCL1-201ENST00000395761 MASP1P48740 699 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 GAS1P54826 345 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 POU6F2P78424 691 aaPredicted RBP15.13■□□□□ 0.01
CXCL1-201ENST00000395761 SNTA1Q13424 505 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 ELOAQ14241 798 aaKnown RBP15.13■□□□□ 0.01
CXCL1-201ENST00000395761 KRT72Q14CN4 511 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 MAPRE2Q15555 327 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 SAXO2Q658L1 398 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 SLC2A7Q6PXP3 512 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 C6orf89Q6UWU4 347 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 ANGPTL8Q6UXH0 198 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 TREML1Q86YW5 311 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 CHERPQ8IWX8 916 aaKnown RBP15.13■□□□□ 0.01
CXCL1-201ENST00000395761 TMEM41AQ96HV5 264 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 SLC35G5Q96KT7 338 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 ZNF597Q96LX8 424 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 RTN4RQ9BZR6 473 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 ZDHHC11Q9H8X9 412 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 OSGIN2Q9Y236 505 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 NINQ8N4C6 2090 aa15.13■□□□□ 0.01
CXCL1-201ENST00000395761 RELNP78509 3460 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 A0A1W2PP18 115 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 CCT8L1PA6NM43 557 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 ACOT7O00154 380 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 NR5A2O00482 541 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 RFXANKO14593 260 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 KRT16P08779 473 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 EVI2BP34910 448 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 CHI3L1P36222 383 aaPredicted RBP15.12■□□□□ 0.01
CXCL1-201ENST00000395761 PSMD4P55036 377 aaKnown RBP15.12■□□□□ 0.01
CXCL1-201ENST00000395761 LRRC74AQ0VAA2 488 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 GRAMD1BQ3KR37 738 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 GTDC1Q4AE62 458 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 TIGD3Q6B0B8 471 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 DNAJC14Q6Y2X3 702 aaPredicted RBP15.12■□□□□ 0.01
CXCL1-201ENST00000395761 BNC2Q6ZN30 1099 aaPredicted RBP15.12■□□□□ 0.01
CXCL1-201ENST00000395761 FGD2Q7Z6J4 655 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 FAM109AQ8N4B1 249 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 WDSUB1Q8N9V3 476 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 OR4C3Q8NH37 302 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 RAB8BQ92930 207 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 SPDL1Q96EA4 605 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 NEURL3Q96EH8 262 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 ITCHQ96J02 903 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 OR51I1Q9H343 314 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 ZNF703Q9H7S9 590 aaPredicted RBP15.12■□□□□ 0.01
CXCL1-201ENST00000395761 LIPGQ9Y5X9 500 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 FLNCQ14315 2725 aa15.12■□□□□ 0.01
CXCL1-201ENST00000395761 A0A1B0GTH9 108 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 B4DXG7 233 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 SNPHO15079 494 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 SCO2O43819 266 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 OR12D1P0DN82 309 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 COX4I1P13073 169 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 CAPN3P20807 821 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 PTPN6P29350 595 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 SRSF1Q07955 248 aaKnown RBP eCLIP15.11■□□□□ 0.01
CXCL1-201ENST00000395761 CYLC2Q14093 348 aaPredicted RBP15.11■□□□□ 0.01
CXCL1-201ENST00000395761 SLC10A1Q14973 349 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.11■□□□□ 0.01
CXCL1-201ENST00000395761 COQ5Q5HYK3 327 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 OR5M10Q6IEU7 315 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 TNFAIP8L2Q6P589 184 aaPredicted RBP15.11■□□□□ 0.01
CXCL1-201ENST00000395761 APOOLQ6UXV4 268 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 OLIG3Q7RTU3 272 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 MARCH3Q86UD3 253 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 RNF130Q86XS8 419 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 GHDCQ8N2G8 530 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 OR1J4Q8NGS1 313 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 MIPOL1Q8TD10 442 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 GTF2H4Q92759 462 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 CMTM5Q96DZ9 223 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 RMND5AQ9H871 391 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 PLSCR2Q9NRY7 297 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 C15orf41Q9Y2V0 281 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 NDUFAF1Q9Y375 327 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 WIF1Q9Y5W5 379 aa15.11■□□□□ 0.01
CXCL1-201ENST00000395761 LOC100653049A0A140TA62 436 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 BBIP1A8MTZ0 92 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms