RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 C16orf52Q8NHV5 167 aa18.9■□□□□ 0.62
PRKCD-202ENST00000394729 THAP3Q8WTV1 239 aaPredicted RBP18.9■□□□□ 0.62
PRKCD-202ENST00000394729 HRASLS5Q96KN8 279 aa18.9■□□□□ 0.62
PRKCD-202ENST00000394729 PCED1AQ9H1Q7 454 aa18.9■□□□□ 0.62
PRKCD-202ENST00000394729 PIGUQ9H490 435 aa18.9■□□□□ 0.62
PRKCD-202ENST00000394729 RSL24D1Q9UHA3 163 aaKnown RBP18.9■□□□□ 0.62
PRKCD-202ENST00000394729 LIPT1Q9Y234 373 aa18.9■□□□□ 0.62
PRKCD-202ENST00000394729 AP3D1O14617 1153 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 STX11O75558 287 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 MASP1P48740 699 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 UGT2B15P54855 530 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 MANEAQ5SRI9 462 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 PRICKLE2Q7Z3G6 844 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 CDRT4Q8N9R6 151 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 MIPOL1Q8TD10 442 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 NDC1Q9BTX1 674 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 PLA2G12AQ9BZM1 189 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 KLHL28Q9NXS3 571 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 KCND3Q9UK17 655 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 LOC400499M0QZD8 3231 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 SH3PXD2BA1X283 911 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 EPHA8P29322 1005 aaPredicted RBP18.89■□□□□ 0.61
PRKCD-202ENST00000394729 RXRGP48443 463 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 EMDP50402 254 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 POU6F2P78424 691 aaPredicted RBP18.89■□□□□ 0.61
PRKCD-202ENST00000394729 CCL7P80098 99 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 EMX1Q04741 257 aaPredicted RBP18.89■□□□□ 0.61
PRKCD-202ENST00000394729 ELOAQ14241 798 aaKnown RBP18.89■□□□□ 0.61
PRKCD-202ENST00000394729 PHF19Q5T6S3 580 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 ARHGAP40Q5TG30 622 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 ZNF770Q6IQ21 691 aaPredicted RBP18.89■□□□□ 0.61
PRKCD-202ENST00000394729 PTCHD4Q6ZW05 846 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 SLC38A9Q8NBW4 561 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 CNDP2Q96KP4 475 aaKnown RBP18.89■□□□□ 0.61
PRKCD-202ENST00000394729 PINK1Q9BXM7 581 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 ITPAQ9BY32 194 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 UCK2Q9BZX2 261 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 NLGN3Q9NZ94 848 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 PILRBQ9UKJ0 227 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 MKL2Q9ULH7 1088 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 ZNF232Q9UNY5 417 aa18.89■□□□□ 0.61
PRKCD-202ENST00000394729 A0A1W2PQM1 296 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 PLOD3O60568 738 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 KCNK2O95069 426 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 THY1P04216 161 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 LCKP06239 509 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 HOXB6P17509 224 aaKnown RBP18.88■□□□□ 0.61
PRKCD-202ENST00000394729 LARS2Q15031 903 aaKnown RBP18.88■□□□□ 0.61
PRKCD-202ENST00000394729 NRMQ8IXM6 262 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 FOLH1BQ9HBA9 442 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 APMAPQ9HDC9 416 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 ZNF226Q9NYT6 803 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 CLDN16Q9Y5I7 305 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 MED12Q93074 2177 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 ABCB7O75027 752 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 ADAM11O75078 769 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 CRISP1P54107 249 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 TUBA4AP68366 448 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 KEAP1Q14145 624 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 RBM48Q5RL73 367 aaKnown RBP18.88■□□□□ 0.61
PRKCD-202ENST00000394729 LANCL3Q6ZV70 420 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 TMEM105Q8N8V8 129 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 C12orf43Q96C57 262 aaKnown RBP18.88■□□□□ 0.61
PRKCD-202ENST00000394729 ISOC1Q96CN7 298 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 OR6C1Q96RD1 312 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 MTHFD2LQ9H903 347 aaPredicted RBP18.88■□□□□ 0.61
PRKCD-202ENST00000394729 BLOC1S6Q9UL45 172 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 HEATR5AQ86XA9 2040 aa18.88■□□□□ 0.61
PRKCD-202ENST00000394729 CNOT1A5YKK6 2376 aaKnown RBP18.87■□□□□ 0.61
PRKCD-202ENST00000394729 CTNSO60931 367 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 HSMCR30P0CW71 290 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 GGT2P36268 569 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 NSDHLQ15738 373 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 ARHGAP11BQ3KRB8 267 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 C16orf47Q6ZP98 133 aaPredicted RBP18.87■□□□□ 0.61
PRKCD-202ENST00000394729 CADM2Q8N3J6 435 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 CNOT9Q92600 299 aaKnown RBP18.87■□□□□ 0.61
PRKCD-202ENST00000394729 SCN3BQ9NY72 215 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 FLRT3Q9NZU0 649 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 A0A1W2PPW3 197 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 S1PR1P21453 382 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 RELAQ04206 551 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 NPSR1Q6W5P4 371 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 TCEANCQ8N8B7 351 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 PRRC1Q96M27 445 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 VCX3AQ9NNX9 186 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 AGAP5A6NIR3 686 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 STSP08842 583 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 CCR4P51679 360 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 HMGA2P52926 109 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 DAB2P98082 770 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 TCTE1Q5JU00 501 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 HEPHL1Q6MZM0 1159 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 OR4C3Q8NH37 302 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 COPS4Q9BT78 406 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 BTBD2Q9BX70 525 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 GABARAPL3Q9BY60 117 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 OR10A5Q9H207 317 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 COMMD3-BMI1R4GMX3 469 aa18.87■□□□□ 0.61
PRKCD-202ENST00000394729 RIF1Q5UIP0 2472 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms