RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 EXO1Q9UQ84 846 aaKnown RBP15.15■□□□□ 0.02
PCDH1-203ENST00000394536 MED31Q9Y3C7 131 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 TSPAN4O14817 238 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 FGF19O95750 216 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 IGHA2P01877 340 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 ACVR2AP27037 513 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 ZNF234Q14588 700 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 TECPR1Q7Z6L1 1165 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 OAFQ86UD1 273 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 TMEFF1Q8IYR6 380 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 CLDN22Q8N7P3 220 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 OR7D2Q96RA2 312 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 COLEC10Q9Y6Z7 277 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 URADA6NGE7 173 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 RFXAPO00287 272 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 RCBTB2O95199 551 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 HIST1H1TP22492 207 aaPredicted RBP15.15■□□□□ 0.02
PCDH1-203ENST00000394536 DDX6P26196 483 aaKnown RBP eCLIP15.15■□□□□ 0.02
PCDH1-203ENST00000394536 SNTB2Q13425 540 aaKnown RBP15.15■□□□□ 0.02
PCDH1-203ENST00000394536 FLYWCH1Q4VC44 716 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 SLC44A3Q8N4M1 653 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 SGPP1Q9BX95 441 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 ZSCAN32Q9NX65 697 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 PPIEQ9UNP9 301 aaKnown RBP15.15■□□□□ 0.02
PCDH1-203ENST00000394536 FCMRO60667 390 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 EDNRAP25101 427 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 SSTR2P30874 369 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 GABRA5P31644 462 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 RPS5P46782 204 aaKnown RBP15.14■□□□□ 0.01
PCDH1-203ENST00000394536 FAPQ12884 760 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 PDGFRLQ15198 375 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 HNRNPA1L2Q32P51 320 aaKnown RBP15.14■□□□□ 0.01
PCDH1-203ENST00000394536 NLRP8Q86W28 1048 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 CCDC28AQ8IWP9 274 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 ANKRD53Q8N9V6 530 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 TMEM106CQ9BVX2 250 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 C1QTNF7Q9BXJ2 289 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 SLA2Q9H6Q3 261 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 A4GALTQ9NPC4 353 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 A0A0G2JMP0 313 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 A0A0X1KG70 313 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 CHURC1-FNTBB4DL54 471 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 KIAA0355O15063 1070 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 B3GALT2O43825 422 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 CCL5P13501 91 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 CEBPBP17676 345 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 DDOSTP39656 456 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 SOX2P48431 317 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 SLC39A5Q6ZMH5 540 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 FAM26EQ8N5C1 309 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 BBS1Q8NFJ9 593 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 OR4M2Q8NGB6 313 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 OR4K14Q8NGD5 310 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 CDS1Q92903 461 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 NXPE3Q969Y0 559 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 NARS2Q96I59 477 aaKnown RBP15.14■□□□□ 0.01
PCDH1-203ENST00000394536 FUZQ9BT04 418 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 SCN10AQ9Y5Y9 1956 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 HRO43593 1189 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 POLR2CP19387 275 aaPredicted RBP15.14■□□□□ 0.01
PCDH1-203ENST00000394536 BMPR1AP36894 532 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 PRDX1Q06830 199 aaKnown RBP15.14■□□□□ 0.01
PCDH1-203ENST00000394536 HYAL2Q12891 473 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 C3orf38Q5JPI3 329 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 SERPINA12Q8IW75 414 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 OR8K3Q8NH51 312 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 TRMT10AQ8TBZ6 339 aaKnown RBP15.14■□□□□ 0.01
PCDH1-203ENST00000394536 ACSL5Q9ULC5 683 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 LIPT1Q9Y234 373 aa15.14■□□□□ 0.01
PCDH1-203ENST00000394536 DOCK4Q8N1I0 1966 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 TEX13CA0A0J9YWL9 993 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 CDC123O75794 336 aaPredicted RBP15.13■□□□□ 0.01
PCDH1-203ENST00000394536 CHRM4P08173 479 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 ARSBP15848 533 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 ZNF3P17036 446 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 PGDP52209 483 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 MVDP53602 400 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 MINDY4Q4G0A6 757 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 PRR23CQ6ZRP0 262 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 ATCAYQ86WG3 371 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 SLC16A11Q8NCK7 471 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 OR4D11Q8NGI4 311 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 OR4K13Q8NH42 304 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 TMEM255BQ8WV15 326 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 ACOT11Q8WXI4 607 aaPredicted RBP15.13■□□□□ 0.01
PCDH1-203ENST00000394536 MSANTD3Q96H12 275 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 ERMAPQ96PL5 475 aaPredicted RBP15.13■□□□□ 0.01
PCDH1-203ENST00000394536 INSM2Q96T92 566 aaPredicted RBP15.13■□□□□ 0.01
PCDH1-203ENST00000394536 AK6Q9Y3D8 172 aaKnown RBP15.13■□□□□ 0.01
PCDH1-203ENST00000394536 MYLKQ15746 1914 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 A0A1W2PRQ8 180 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 UNC119BA6NIH7 251 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 FAM171A2A8MVW0 826 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 AIFM1O95831 613 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 CHRNB1P11230 501 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 GABRA3P34903 492 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 ETV6P41212 452 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 AP2S1P53680 142 aaPredicted RBP15.13■□□□□ 0.01
PCDH1-203ENST00000394536 CDK3Q00526 305 aa15.13■□□□□ 0.01
PCDH1-203ENST00000394536 TSPAN31Q12999 210 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms