RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 UHMK1Q8TAS1 419 aaKnown RBP13.78□□□□□ -0.2
CHMP3-202ENST00000393773 GFM2Q969S9 779 aaKnown RBP13.78□□□□□ -0.2
CHMP3-202ENST00000393773 STMN4Q9H169 189 aaPredicted RBP13.78□□□□□ -0.2
CHMP3-202ENST00000393773 ACSS3Q9H6R3 686 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 FAM120CQ9NX05 1096 aaKnown RBP13.78□□□□□ -0.2
CHMP3-202ENST00000393773 UTP11Q9Y3A2 253 aaKnown RBP13.78□□□□□ -0.2
CHMP3-202ENST00000393773 AP4B1Q9Y6B7 739 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 SHISA8B8ZZ34 492 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 MANBAO00462 879 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 SS18L1O75177 396 aaPredicted RBP13.77□□□□□ -0.21
CHMP3-202ENST00000393773 OR4F21O95013 312 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 RPS3AP61247 264 aaKnown RBP13.77□□□□□ -0.21
CHMP3-202ENST00000393773 ZNF844Q08AG5 666 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 TSNAXIP1Q2TAA8 658 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 HEPHL1Q6MZM0 1159 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 SAMD14Q8IZD0 417 aaPredicted RBP13.77□□□□□ -0.21
CHMP3-202ENST00000393773 MAPK1IP1LQ8NDC0 245 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 C11orf24Q96F05 449 aaPredicted RBP13.77□□□□□ -0.21
CHMP3-202ENST00000393773 PLPPR2Q96GM1 343 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 ACPTQ9BZG2 426 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 RAB17Q9H0T7 212 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 SLC35C2Q9NQQ7 365 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 PLSCR4Q9NRQ2 329 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 NMRK1Q9NWW6 199 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 TAS2R9Q9NYW1 312 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 SENP1Q9P0U3 644 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 EMC9Q9Y3B6 208 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 NBEAL1Q6ZS30 2694 aa13.77□□□□□ -0.21
CHMP3-202ENST00000393773 CADP27708 2225 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 YLPM1P49750 1951 aaKnown RBP13.76□□□□□ -0.21
CHMP3-202ENST00000393773 IGLV3-32A0A0A0MS00 114 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 RNF223E7ERA6 249 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 COQ9O75208 318 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 TIA1P31483 386 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHMP3-202ENST00000393773 HTR6P50406 440 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 RPS4XP62701 263 aaKnown RBP13.76□□□□□ -0.21
CHMP3-202ENST00000393773 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHMP3-202ENST00000393773 PRSS53Q2L4Q9 553 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 GLYR1Q49A26 553 aaPredicted RBP13.76□□□□□ -0.21
CHMP3-202ENST00000393773 SH2D4BQ5SQS7 431 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 TMEM151AQ8N4L1 468 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 CDYL2Q8N8U2 506 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 C16orf78Q8WTQ4 265 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 GMPPAQ96IJ6 420 aaPredicted RBP13.76□□□□□ -0.21
CHMP3-202ENST00000393773 ADGRG7Q96K78 797 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 SHCBP1LQ9BZQ2 653 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 MRPL46Q9H2W6 279 aaKnown RBP13.76□□□□□ -0.21
CHMP3-202ENST00000393773 PTGES2Q9H7Z7 377 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 GIMAP4Q9NUV9 329 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 NINJ2Q9NZG7 142 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 CLEC4AQ9UMR7 237 aa13.76□□□□□ -0.21
CHMP3-202ENST00000393773 A0A087WV62 115 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 GNG14A0A1W2PPG7 69 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 ESYT3A0FGR9 886 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 MYO1GB0I1T2 1018 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 OVOL3O00110 214 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 ZNF17P17021 662 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 IL11P20809 199 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 EIF1AXP47813 144 aaKnown RBP13.75□□□□□ -0.21
CHMP3-202ENST00000393773 VEZF1Q14119 521 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 HEPACAMQ14CZ8 416 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 CLEC12BQ2HXU8 276 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 CTU2Q2VPK5 515 aaKnown RBP13.75□□□□□ -0.21
CHMP3-202ENST00000393773 CYP27C1Q4G0S4 372 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 SPIN4Q56A73 249 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 MARCH3Q86UD3 253 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 WFDC8Q8IUA0 241 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 PHC2Q8IXK0 858 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 LILRB1Q8NHL6 650 aaPredicted RBP13.75□□□□□ -0.21
CHMP3-202ENST00000393773 AKAP1Q92667 903 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHMP3-202ENST00000393773 APIPQ96GX9 242 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 NPAS1Q99742 590 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 MRPL57Q9BQC6 102 aaKnown RBP13.75□□□□□ -0.21
CHMP3-202ENST00000393773 EBPLQ9BY08 206 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 FUT8Q9BYC5 575 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 ACTR6Q9GZN1 396 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 OR10A4Q9H209 315 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 SDHAF3Q9NRP4 125 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 ZDHHC18Q9NUE0 388 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 C19orf53Q9UNZ5 99 aaPredicted RBP13.75□□□□□ -0.21
CHMP3-202ENST00000393773 LAMP3Q9UQV4 416 aa13.75□□□□□ -0.21
CHMP3-202ENST00000393773 EIF1AYO14602 144 aaKnown RBP13.74□□□□□ -0.21
CHMP3-202ENST00000393773 IL33O95760 270 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 KRT6AP02538 564 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 KRT6BP04259 564 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 COL6A2P12110 1019 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 PSMB1P20618 241 aaKnown RBP13.74□□□□□ -0.21
CHMP3-202ENST00000393773 HSD17B3P37058 310 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 KRT6CP48668 564 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 CLCQ05315 142 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 RASA2Q15283 850 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 ETFDHQ16134 617 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 SGCBQ16585 318 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 DECR1Q16698 335 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 LGSNQ5TDP6 509 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 PPP4R4Q6NUP7 873 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 ADAM5Q6NVV9 412 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 GALNT18Q6P9A2 607 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 TMEM107Q6UX40 140 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 APOOLQ6UXV4 268 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms