RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 TP53P04637 393 aaPredicted RBP17.19■□□□□ 0.34
TRAF3-203ENST00000392745 TARDBPQ13148 414 aaKnown RBP eCLIP17.19■□□□□ 0.342e-7■■■■□ 26.4
TRAF3-203ENST00000392745 LRRC32Q14392 662 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 CRTC2Q53ET0 693 aaPredicted RBP17.19■□□□□ 0.34
TRAF3-203ENST00000392745 RNLSQ5VYX0 342 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 REEP3Q6NUK4 255 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 TNFAIP8L2Q6P589 184 aaPredicted RBP17.19■□□□□ 0.34
TRAF3-203ENST00000392745 ZNF730Q6ZMV8 503 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 IKBIPQ70UQ0 350 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 FAM109AQ8N4B1 249 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 C19orf18Q8NEA5 215 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 OR4D11Q8NGI4 311 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 MTERF3Q96E29 417 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 TCEAL2Q9H3H9 227 aaPredicted RBP17.19■□□□□ 0.34
TRAF3-203ENST00000392745 LMAN1LQ9HAT1 526 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 DIMT1Q9UNQ2 313 aaKnown RBP17.19■□□□□ 0.34
TRAF3-203ENST00000392745 SLCO1B1Q9Y6L6 691 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 LRIT2A6NDA9 550 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 TMPRSS11DO60235 418 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 CLEC3AO75596 197 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 OR2B3O76000 313 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 RAB36O95755 333 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 RPL3P39023 403 aaKnown RBP17.19■□□□□ 0.34
TRAF3-203ENST00000392745 OCLNQ16625 522 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 TRIQKQ629K1 86 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 KIAA0895LQ68EN5 471 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 TIGD3Q6B0B8 471 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 CNIH2Q6PI25 160 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 SYT13Q7L8C5 426 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 LAPTM4BQ86VI4 370 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 SLC38A6Q8IZM9 456 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 RLN3Q8WXF3 142 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 KIAA1143Q96AT1 154 aaPredicted RBP17.19■□□□□ 0.34
TRAF3-203ENST00000392745 RGMAQ96B86 450 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 TEFMQ96QE5 360 aaKnown RBP17.19■□□□□ 0.34
TRAF3-203ENST00000392745 GPR174Q9BXC1 333 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 CXorf36Q9H7Y0 433 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 MIEF1Q9NQG6 463 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 RBFOX1Q9NWB1 397 aaKnown RBP17.19■□□□□ 0.34
TRAF3-203ENST00000392745 MCUBQ9NWR8 336 aa17.19■□□□□ 0.34
TRAF3-203ENST00000392745 ISM1B1AKI9 464 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 PRAMEF26H0Y7S4 382 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 MEN1O00255 615 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 BTN3A3O00478 584 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 MAN2B1O00754 1011 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 HPGDSO60760 199 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 PDE9AO76083 593 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 FAM157BP0CG42 384 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 F3P13726 295 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 IFNA8P32881 189 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 SYT14P1Q58G82 188 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 ZNF542PQ5EBM4 170 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 FAM160A2Q8N612 972 aaPredicted RBP17.18■□□□□ 0.34
TRAF3-203ENST00000392745 HORMAD2Q8N7B1 307 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 SLC38A5Q8WUX1 472 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 GATAD2BQ8WXI9 593 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 UCN3Q969E3 161 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 GFM1Q96RP9 751 aaKnown RBP17.18■□□□□ 0.34
TRAF3-203ENST00000392745 PPP1R3EQ9H7J1 279 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 NIPAL2Q9H841 368 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 WSB2Q9NYS7 404 aaPredicted RBP17.18■□□□□ 0.34
TRAF3-203ENST00000392745 STMN3Q9NZ72 180 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 KLF15Q9UIH9 416 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 HSPB11Q9Y547 144 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 LOC105371267A0A1B0GV96 52 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 A0A1W2PQ72 361 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 ABATP80404 500 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 LSM11P83369 360 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRAF3-203ENST00000392745 ZIC1Q15915 447 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 PLK5Q496M5 336 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 SFTPA2Q8IWL1 248 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 ZFP41Q8N8Y5 198 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 SLC7A13Q8TCU3 470 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 LRR1Q96L50 414 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 HDHD5Q9BXW7 423 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 TRIM45Q9H8W5 580 aaPredicted RBP17.18■□□□□ 0.34
TRAF3-203ENST00000392745 OR6C2Q9NZP2 312 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 C5AR2Q9P296 337 aa17.18■□□□□ 0.34
TRAF3-203ENST00000392745 TESQ9UGI8 421 aaKnown RBP17.18■□□□□ 0.34
TRAF3-203ENST00000392745 SF3B6Q9Y3B4 125 aaKnown RBP17.18■□□□□ 0.34
TRAF3-203ENST00000392745 C4orf51C9J302 202 aa17.17■□□□□ 0.34
TRAF3-203ENST00000392745 H1F0P07305 194 aaKnown RBP17.17■□□□□ 0.34
TRAF3-203ENST00000392745 DDCP20711 480 aa17.17■□□□□ 0.34
TRAF3-203ENST00000392745 FABP5Q01469 135 aa17.17■□□□□ 0.34
TRAF3-203ENST00000392745 FZD5Q13467 585 aa17.17■□□□□ 0.34
TRAF3-203ENST00000392745 WDR45BQ5MNZ6 344 aa17.17■□□□□ 0.34
TRAF3-203ENST00000392745 OR4C11Q6IEV9 310 aa17.17■□□□□ 0.34
TRAF3-203ENST00000392745 PATE1Q8WXA2 126 aa17.17■□□□□ 0.34
TRAF3-203ENST00000392745 RAB8BQ92930 207 aa17.17■□□□□ 0.34
TRAF3-203ENST00000392745 C17orf62Q9BQA9 187 aa17.17■□□□□ 0.34
TRAF3-203ENST00000392745 DDX31Q9H8H2 851 aaKnown RBP17.17■□□□□ 0.34
TRAF3-203ENST00000392745 COLQQ9Y215 455 aaPredicted RBP17.17■□□□□ 0.34
TRAF3-203ENST00000392745 LOC102723532A0A0G2JNH3 316 aa17.16■□□□□ 0.34
TRAF3-203ENST00000392745 FAM240BA0A1B0GVZ2 78 aa17.16■□□□□ 0.34
TRAF3-203ENST00000392745 FAAHO00519 579 aa17.16■□□□□ 0.34
TRAF3-203ENST00000392745 LYRM1O43325 122 aa17.16■□□□□ 0.34
TRAF3-203ENST00000392745 HLA-DQB1P01920 261 aa17.16■□□□□ 0.34
TRAF3-203ENST00000392745 NDUFS1P28331 727 aa17.16■□□□□ 0.34
TRAF3-203ENST00000392745 RABIFP47224 123 aa17.16■□□□□ 0.34
TRAF3-203ENST00000392745 CCR5P51681 352 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms