RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 ZFPM2Q8WW38 1151 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 TTC9Q92623 222 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 S100A16Q96FQ6 103 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 GAS2L1Q99501 681 aaPredicted RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SLC38A3Q99624 504 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 NKX6-2Q9C056 277 aaPredicted RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SLC6A16Q9GZN6 736 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 C20orf85Q9H1P6 137 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 FAM171A2A8MVW0 826 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 KRT33AO76009 404 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 PSMB1P20618 241 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 IDSP22304 550 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 MMP11P24347 488 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ELAVL4P26378 380 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 KIAA0040Q15053 153 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ADGRF1Q5T601 910 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ZNF280BQ86YH2 543 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ZNF740Q8NDX6 193 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SORCS1Q8WY21 1168 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 PPP1R16AQ96I34 528 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ADAT1Q9BUB4 502 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 LINC00862A6NCI5 91 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SMAD6O43541 496 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SLC2A10O95528 541 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 HPXP02790 462 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SNRPD1P62314 119 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 TGM3Q08188 693 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 UPP1Q16831 310 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 UNQ6126/PRO20091Q6UXV3 157 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 DEFB132Q7Z7B7 95 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 CHST4Q8NCG5 386 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 GPR26Q8NDV2 337 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 OR5W2Q8NH69 310 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 HAVCR2Q8TDQ0 301 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SLC38A5Q8WUX1 472 aa16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 PELOQ9BRX2 385 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 NXF2Q9GZY0 626 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 DIMT1Q9UNQ2 313 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-202ENST00000391993 LRIT2A6NDA9 550 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ZNF821O75541 412 aaPredicted RBP15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ADRB1P08588 477 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ACP2P11117 423 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 GSTM3P21266 225 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 AKR1C3P42330 323 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ILKQ13418 452 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ZDHHC20Q5W0Z9 365 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 GALNTL5Q7Z4T8 443 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 RBP7Q96R05 134 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 RAD9AQ99638 391 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 MCHR1Q99705 422 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ABCA3Q99758 1704 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ATF6BQ99941 703 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 MGME1Q9BQP7 344 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ELF5Q9UKW6 265 aaPredicted RBP15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 PCDHB8Q9UN66 801 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 HEPACAM2A8MVW5 462 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 KDELR3O43731 214 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ACHEP22303 614 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 RAB40BQ12829 278 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 CCSMST1Q4G0I0 132 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ZNF546Q86UE3 836 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 PM20D2Q8IYS1 436 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 WNT2BQ93097 391 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ABHD1Q96SE0 405 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SLC6A20Q9NP91 592 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 E9PI62 339 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 TSPAN6O43657 245 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 KCNJ13O60928 360 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ACADMP11310 421 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ATP1B2P14415 290 aaPredicted RBP15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 FLI1Q01543 452 aaPredicted RBP15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ZNF385BQ569K4 471 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 LRRTM4Q86VH4 590 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 C17orf64Q86WR6 236 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SLC44A3Q8N4M1 653 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 KCT2Q8NC54 265 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 STOML3Q8TAV4 291 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 NEIL2Q969S2 332 aa15.99■□□□□ 0.15
TRAF3IP1-202ENST00000391993 TRBV2A0A0J9YWF9 115 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 YY2O15391 372 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 FADS1O60427 444 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 PRAMEF2O60811 474 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ARL6IP5O75915 188 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 LUMP51884 338 aaPredicted RBP15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 BTG1P62324 171 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 HEPHL1Q6MZM0 1159 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 NHLRC1Q6VVB1 395 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 ADGRG3Q86Y34 549 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 LILRA3Q8N6C8 439 aaPredicted RBP15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 BBS1Q8NFJ9 593 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 WDR20Q8TBZ3 569 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 LINC01599Q8WXQ3 324 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 SCML2Q9UQR0 700 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 FAM74A7A6NL05 159 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 F5H5P2 479 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 LDOC1O95751 146 aaPredicted RBP15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 AP1S2P56377 157 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 MELKQ14680 651 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 PCGF3Q3KNV8 242 aa15.98■□□□□ 0.15
TRAF3IP1-202ENST00000391993 FAM74A3Q4VXF1 159 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms