RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CABIN1Q9Y6J0 2220 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DNAH7Q8WXX0 4024 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ZSWIM8A7E2V4 1837 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PRRC2CQ9Y520 2896 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IGLV3-22A0A075B6J6 115 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TRAV6A0A075B6T7 132 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHV1OR15-1A0A075B7D0 117 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHV3-66A0A0C4DH42 116 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM237AA0A1B0GTK4 181 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SMIM28A0A1B0GU29 152 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A1B0GUL7 405 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A1B0GVX0 72 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A1W2PQL4 384 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MBLAC1A4D2B0 266 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GOLGA6L4A6NEF3 574 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GOLGA6L3A6NEY3 463 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 LRRC53A6NM62 1247 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF729A6NN14 1252 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF732B4DXR9 585 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 F5H6K3 240 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 INS-IGF2F8WCM5 200 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 H3BQ06 376 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GOLIM4O00461 696 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PIP5K1BO14986 540 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC22A1O15245 554 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ERI3O43414 337 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ANP32CO43423 234 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PSCAO43653 123 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ASNA1O43681 348 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CD5LO43866 347 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SSX4O60224 188 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SH3BP5O60239 455 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MRPS14O60783 128 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SCN2BO60939 215 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF780AO75290 641 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TACC1O75410 805 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CDC45O75419 566 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SUPT3HO75486 399 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GCM2O75603 506 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CNMDO75829 334 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TNFSF13O75888 250 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NOL4O94818 638 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 RHOBTB1O94844 696 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NKX2-2O95096 273 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC25A14O95258 325 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SNAPINO95295 136 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PGLSO95336 258 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ANP32DO95626 131 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FGF19O95750 216 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CHRNA1P02708 482 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC4A1P02730 911 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GBAP04062 536 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CD3DP04234 171 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CD2P06729 351 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ADRB2P07550 413 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IGFBP1P08833 259 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 OR8U8P0C7N1 319 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 OR56A5P0C7T3 313 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 UBTFL1P0CB47 393 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IRF2P14316 349 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IMPDH1P20839 514 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 COX7A1P24310 79 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CTNNA2P26232 953 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 RNASE4P34096 147 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MPV17P39210 176 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 EPS15P42566 896 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MSH2P43246 934 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CXCL12P48061 93 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 RFX3P48380 749 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CSNK1A1P48729 337 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC9A3P48764 834 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 EVX1P49640 407 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ACOT2P49753 483 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TMED10P49755 219 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NUMBP49757 651 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GNAQP50148 359 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TPD52P55327 224 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TAS2R40P59535 323 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PRR3P79522 188 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 EFNB1P98172 346 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MAT1AQ00266 395 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CDKL1Q00532 357 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TFAP4Q01664 338 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 KLRC3Q07444 240 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 WASHC5Q12768 1159 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MRPL28Q13084 256 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SNTB2Q13425 540 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GK2Q14410 553 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NFE2L1Q14494 772 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FGFBP1Q14512 234 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MELKQ14680 651 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CASP8Q14790 479 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 EMC2Q15006 297 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ADIPOQQ15848 244 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NRF1Q16656 503 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 LONRF1Q17RB8 773 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM183BQ1AE95 376 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC35G1Q2M3R5 365 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ALG11Q2TAA5 492 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PGGHGQ32M88 737 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms