RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 RORAP35398 523 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 RPL5P46777 297 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 DAPP51397 102 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 IL1RL1Q01638 556 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 IL11RAQ14626 422 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNHIT3Q15649 155 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 CT45A2Q5DJT8 189 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 RBM44Q6ZP01 1051 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF605Q86T29 641 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 OFCC1Q8IZS5 231 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 SLC2A12Q8TD20 617 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 HOXB13Q92826 284 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 ARSGQ96EG1 525 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 LMF1Q96S06 567 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 RBM4BQ9BQ04 359 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 PELOQ9BRX2 385 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 RBM4Q9BWF3 364 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 PINK1Q9BXM7 581 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 TOR3AQ9H497 397 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 IFT80Q9P2H3 777 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 MEN1O00255 615 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ADAMDEC1O15204 470 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 TPST2O60704 377 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ATP6V1G1O75348 118 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 CLPTM1O96005 669 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 THRBP10828 461 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 IL7RP16871 459 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 POLR2IP36954 125 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ARHGDIAP52565 204 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 SLC37A1P57057 533 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 MC2RQ01718 297 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 PIN1Q13526 163 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ELAVL1Q15717 326 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 NPTX1Q15818 432 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF836Q6ZNA1 936 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF619Q8N2I2 560 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 DHRSXQ8N5I4 330 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 OR4C15Q8NGM1 316 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF721Q8TF20 911 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 EPYCQ99645 322 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 COL25A1Q9BXS0 654 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 TGIF2Q9GZN2 237 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF696Q9H7X3 374 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 C8orf4Q9NR00 106 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF443Q9Y2A4 671 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 NTNG1Q9Y2I2 539 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 IGLV3-12A0A075B6K2 115 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 IDSB3KWA1 339 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 BRINP1O60477 761 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 DPM1O60762 260 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 CPNE3O75131 537 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 TFAP2AP05549 437 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 GALNSP34059 522 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ETV5P41161 510 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 NUBP1P53384 320 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 CDH15P55291 814 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 BIKQ13323 160 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 SLC36A3Q495N2 470 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 OVCH1Q7RTY7 1134 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 PEX5LQ8IYB4 626 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 MPP4Q96JB8 637 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF578Q96N58 590 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 MBOAT4Q96T53 435 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 NUDT9Q9BW91 350 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 ANKRD60Q9BZ19 345 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 NMNAT1Q9HAN9 279 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 SLC39A1Q9NY26 324 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 USE1Q9NZ43 259 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 SLC9A8Q9Y2E8 581 aa11.3□□□□□ -0.6
SPTBN1-203ENST00000389980 CNOT1A5YKK6 2376 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 TRBV4-1A0A0J9YWV2 114 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 AGAP5A6NIR3 686 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 KIAA0513O60268 411 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 BCAS1O75363 584 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 UGT2B17O75795 530 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 GADD45GO95257 159 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 HPRP00739 348 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 ALBP02768 609 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 IGKV3-11P04433 115 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 HEXBP07686 556 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 HBQ1P09105 142 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 PIGAP37287 484 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 INSM1Q01101 510 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 DCTN2Q13561 401 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF614Q8N883 585 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 ATG16L2Q8NAA4 619 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 ZSCAN1Q8NBB4 408 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 PLPP5Q8NEB5 264 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 OR9Q2Q8NGE9 314 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 ULBP3Q9BZM4 244 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 NRSN2Q9GZP1 204 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 SAP130Q9H0E3 1048 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 GABARAPL1Q9H0R8 117 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 KIF17Q9P2E2 1029 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 NCDNQ9UBB6 729 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 KCND3Q9UK17 655 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 A4GNTQ9UNA3 340 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 OR10H1Q9Y4A9 318 aa11.29□□□□□ -0.6
SPTBN1-203ENST00000389980 B3GALT1Q9Y5Z6 326 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms