RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 IFNA16P05015 189 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 IGFBP1P08833 259 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 MMP11P24347 488 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 PGDP52209 483 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 ST3GAL3Q11203 375 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNHIT3Q15649 155 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 B3GNT6Q6ZMB0 384 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 ZAR1Q86SH2 424 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 SLC38A4Q969I6 547 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 MVB12AQ96EY5 273 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 VSTM2LQ96N03 204 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 CNPPD1Q9BV87 410 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 IMPAD1Q9NX62 359 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 SERTAD3Q9UJW9 196 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 ATXN7L1Q9ULK2 861 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 CDC14AQ9UNH5 594 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 DTX4Q9Y2E6 619 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 A0A087WUU8 490 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 LY6G6EA0A0G2JKS1 128 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 SIGLEC6O43699 453 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 SOX14O95416 240 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 NID1P14543 1247 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 PNLIPP16233 465 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 GABRB1P18505 474 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 PCMT1P22061 227 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 CNR2P34972 360 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 PEX19P40855 299 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 GCGRP47871 477 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 CSNK2BP67870 215 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 TRAM2Q15035 370 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 EIPR1Q53HC9 387 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 AP1ARQ63HQ0 302 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 C1orf94Q6P1W5 598 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 GUSBP11Q6P575 273 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 TMPRSS9Q7Z410 1059 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 OR4N2Q8NGD1 307 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 PTCHD1Q96NR3 888 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 NDC1Q9BTX1 674 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 LHPPQ9H008 270 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF768Q9H5H4 540 aaKnown RBP18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 ERVK-19Q9WJR5 959 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 U3KQA8 63 aa18.43■□□□□ 0.54
PDLIM5-205ENST00000380180 M0R129 80 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 CFIP05156 583 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 SLC5A2P31639 672 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 IFNA8P32881 189 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 RFX3P48380 749 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF136P52737 540 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 CDC42P60953 191 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 EMX1Q04741 257 aaPredicted RBP18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 FUT7Q11130 342 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 SERTAD2Q14140 314 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 NR0B2Q15466 257 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 PERM1Q5SV97 790 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 TMEM71Q6P5X7 295 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF574Q6ZN55 896 aaPredicted RBP18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 OR13F1Q8NGS4 319 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 PMM1Q92871 262 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 POLE3Q9NRF9 147 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 FGF21Q9NSA1 209 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 H3BN98 237 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 PRAMEF2O60811 474 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 SEC14L2O76054 403 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 TP53P04637 393 aaPredicted RBP18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 MSL3P1P0C860 447 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 TNNI3P19429 210 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 RNF144AP50876 292 aaPredicted RBP18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 COX10Q12887 443 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 MRPL2Q5T653 305 aaKnown RBP18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 GPR107Q5VW38 600 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 GTF2IRD2BQ6EKJ0 949 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 CD300LDQ6UXZ3 194 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 PLEKHM3Q6ZWE6 761 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 GTF2IRD2Q86UP8 949 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 ISOC1Q96CN7 298 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF501Q96CX3 271 aaPredicted RBP18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 CNDP2Q96KP4 475 aaKnown RBP18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF578Q96N58 590 aaPredicted RBP18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 GPA33Q99795 319 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 GAREM1Q9H706 876 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 PTTG2Q9NZH5 202 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 GMEB2Q9UKD1 530 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 PCDHGB1Q9Y5G3 927 aa18.42■□□□□ 0.54
PDLIM5-205ENST00000380180 CDHR4A6H8M9 788 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 NTN1O95631 604 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 THY1P04216 161 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 BIKQ13323 160 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 FLYWCH1Q4VC44 716 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 OR1F2PQ96R84 312 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 OR10A5Q9H207 317 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 ANKRD19PQ9H560 264 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 AMBNQ9NP70 447 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 PLCXD1Q9NUJ7 323 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 PCDHGA10Q9Y5H3 936 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 NCOR1O75376 2440 aa18.41■□□□□ 0.54
PDLIM5-205ENST00000380180 RGS10O43665 173 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 IGKV1D-16P01601 117 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 GKN3PP0CG01 181 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 PRG2P13727 222 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 PCSK6P29122 969 aa18.4■□□□□ 0.54
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