RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TP53INP1Q96A56 240 aa22.72■■□□□ 1.23
ECHDC3-201ENST00000379215 ZNF184Q99676 751 aaPredicted RBP22.72■■□□□ 1.23
ECHDC3-201ENST00000379215 CIB1Q99828 191 aa22.72■■□□□ 1.23
ECHDC3-201ENST00000379215 HOXD1Q9GZZ0 328 aa22.72■■□□□ 1.23
ECHDC3-201ENST00000379215 QRSL1Q9H0R6 528 aaKnown RBP22.72■■□□□ 1.23
ECHDC3-201ENST00000379215 NTN4Q9HB63 628 aa22.72■■□□□ 1.23
ECHDC3-201ENST00000379215 KIF26BQ2KJY2 2108 aa22.72■■□□□ 1.23
ECHDC3-201ENST00000379215 A0A1W2PQ72 361 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 H0YJX3 145 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 NID1P14543 1247 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 OR1E2P47887 323 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 SLC26A5P58743 744 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 EXT1Q16394 746 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 IQCCQ4KMZ1 466 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 RNF220Q5VTB9 566 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 IZUMO2Q6UXV1 221 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 HIPK1Q86Z02 1210 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 APCDD1LQ8NCL9 501 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 OR4N2Q8NGD1 307 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 NR4A3Q92570 626 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 TMBIM1Q969X1 311 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 OSBPL10Q9BXB5 764 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 ZNF700Q9H0M5 742 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 NXF5Q9H1B4 397 aaKnown RBP22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 CDV3Q9UKY7 258 aaKnown RBP22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 TCFL5Q9UL49 500 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 FARSAQ9Y285 508 aaKnown RBP22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 SAC3D1A6NKF1 404 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 RBMS1P29558 406 aaKnown RBP22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 KRT20P35900 424 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 GABREP78334 506 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 PUM1Q14671 1186 aaKnown RBP eCLIP22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 PPP4R4Q6NUP7 873 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 VRK2Q86Y07 508 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 OR5K1Q8NHB7 308 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 NRBF2Q96F24 287 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 PIP5K1AQ99755 562 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 AMBRA1Q9C0C7 1298 aa22.71■■□□□ 1.23
ECHDC3-201ENST00000379215 SEC24DO94855 1032 aaPredicted RBP22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 IL33O95760 270 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 TNFRSF1BP20333 461 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 DNAJA1P31689 397 aaKnown RBP22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 RFX3P48380 749 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 HSPA13P48723 471 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 RNF4P78317 190 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 NNATQ16517 81 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 NRF1Q16656 503 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 ZNF441Q8N8Z8 693 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 ZG16BQ96DA0 208 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 EPYCQ99645 322 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 ARHGDIGQ99819 225 aa22.7■■□□□ 1.22
ECHDC3-201ENST00000379215 G3V2T6 193 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 RAD1O60671 282 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 UGT2B17O75795 530 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 RASAL1O95294 804 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 STAT5AP42229 794 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 NRG3P56975 720 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 SSPNQ14714 243 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 PCOLCEQ15113 449 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 ZNF141Q15928 474 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 SHQ1Q6PI26 577 aaKnown RBP22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 IGF2-ASQ6U949 168 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 CMIPQ8IY22 773 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 SLC34A3Q8N130 599 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 ZNF527Q8NB42 609 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 ZSCAN1Q8NBB4 408 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 DNAJC9Q8WXX5 260 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 C8orf44Q96CB5 159 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 COQ10BQ9H8M1 238 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 RYDENQ9NUL5 291 aaKnown RBP22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 SAMHD1Q9Y3Z3 626 aaKnown RBP22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 HS3ST3B1Q9Y662 390 aa22.69■■□□□ 1.22
ECHDC3-201ENST00000379215 IGHV1-45A0A0A0MS14 117 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 ZFAND5O76080 213 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 IGKV1D-16P01601 117 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 FPR1P21462 350 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 DCTP40126 519 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 ATP12AP54707 1039 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 SMIM11AP58511 58 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 EEF1A1P68104 462 aaKnown RBP22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 DNASE1L3Q13609 305 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 ZNF836Q6ZNA1 936 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 TMPRSS7Q7RTY8 843 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 EPHX4Q8IUS5 362 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 CBR4Q8N4T8 237 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 SLC35B4Q969S0 331 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 FBXO34Q9NWN3 711 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 TRBV11-1A0A0K0K1C0 115 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 PRAMEF25A6NGN4 478 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 ZNF26P17031 533 aaPredicted RBP22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 IL12BP29460 328 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 IFNA8P32881 189 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 NR0B1P51843 470 aaKnown RBP22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 TAGAPQ8N103 731 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 VANGL1Q8TAA9 524 aaPredicted RBP22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 DIO2Q92813 273 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 KCND3Q9UK17 655 aa22.68■■□□□ 1.22
ECHDC3-201ENST00000379215 NPIPB9F8W1W9 429 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms