RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 ARIH2OSQ8N7S6 290 aa17■□□□□ 0.31
TDP2-202ENST00000378198 MS4A4EQ96PG1 132 aa17■□□□□ 0.31
TDP2-202ENST00000378198 JAM3Q9BX67 310 aa17■□□□□ 0.31
TDP2-202ENST00000378198 KRCC1Q9NPI7 259 aaPredicted RBP17■□□□□ 0.31
TDP2-202ENST00000378198 GDE1Q9NZC3 331 aa17■□□□□ 0.31
TDP2-202ENST00000378198 NTMQ9P121 344 aa17■□□□□ 0.31
TDP2-202ENST00000378198 COMMD3Q9UBI1 195 aa17■□□□□ 0.31
TDP2-202ENST00000378198 ZNF443Q9Y2A4 671 aaPredicted RBP17■□□□□ 0.31
TDP2-202ENST00000378198 CDH10Q9Y6N8 788 aa17■□□□□ 0.31
TDP2-202ENST00000378198 COLEC10Q9Y6Z7 277 aa17■□□□□ 0.31
TDP2-202ENST00000378198 SCN3AQ9NY46 2000 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 TBC1D3KA0A087X1G2 549 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 SMIM30A4D0T7 59 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 TBC1D3FA6NER0 549 aaPredicted RBP16.99■□□□□ 0.31
TDP2-202ENST00000378198 B4DXG7 233 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 LALBAP00709 142 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 GPR4P46093 362 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 HOXC5Q00444 222 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 TBC1D3GQ6DHY5 549 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 MFSD12Q6NUT3 480 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 GET4Q7L5D6 327 aaPredicted RBP16.99■□□□□ 0.31
TDP2-202ENST00000378198 ATP6V1C2Q8NEY4 427 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 OR2T33Q8NG76 320 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 C10orf90Q96M02 699 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 SOSTQ9BQB4 213 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 ZNF649Q9BS31 505 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 RNF121Q9H920 327 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 ASB6Q9NWX5 421 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 POLHQ9Y253 713 aa16.99■□□□□ 0.31
TDP2-202ENST00000378198 PLA2G10O15496 165 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 HLA-DQB1P01920 261 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 THY1P04216 161 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 APODP05090 189 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 NDUFV2P19404 249 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 TCEA1P23193 301 aaKnown RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 CFL1P23528 166 aaKnown RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 RPS15AP62244 130 aaKnown RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 PUS10Q3MIT2 529 aaKnown RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 MZT2AQ6P582 158 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 PAQR7Q86WK9 346 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 MARCH9Q86YJ5 346 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 PEX5LQ8IYB4 626 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 SAMD14Q8IZD0 417 aaPredicted RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 LRRC25Q8N386 305 aaPredicted RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 OR7G2Q8NG99 324 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 GANCQ8TET4 914 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 TMEM255BQ8WV15 326 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 FRMD6Q96NE9 622 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 APOOQ9BUR5 198 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 SLC17A9Q9BYT1 436 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 MARCH7Q9H992 704 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 TBC1D17Q9HA65 648 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 CBLCQ9ULV8 474 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 NTNG1Q9Y2I2 539 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 GABRPO00591 440 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 PIP5K1CO60331 668 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 RNGTTO60942 597 aaKnown RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 CELP19835 753 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 GALP22466 123 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 MYL9P24844 172 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 IGFALSP35858 605 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 ATP6V1E1P36543 226 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 CAV3P56539 151 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 MRPS15P82914 257 aaKnown RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 RGS1Q08116 209 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 ARHGAP11BQ3KRB8 267 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 FAM111BQ6SJ93 734 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 KCT2Q8NC54 265 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 SLC16A11Q8NCK7 471 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 ENKURQ8TC29 256 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 DNAJA4Q8WW22 397 aaPredicted RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 SPRYD4Q8WW59 207 aaPredicted RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 SLC7A6Q92536 515 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 CDS1Q92903 461 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 ATF6BQ99941 703 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 TMED9Q9BVK6 235 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 PPP1R3EQ9H7J1 279 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 OR6C2Q9NZP2 312 aa16.98■□□□□ 0.31
TDP2-202ENST00000378198 NDRG2Q9UN36 371 aaKnown RBP16.98■□□□□ 0.31
TDP2-202ENST00000378198 A0A1W2PQU0 124 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 PRR23AA6NEV1 266 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 KIR2DL3P43628 341 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 TNFRSF17Q02223 184 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 QPRTQ15274 297 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.97■□□□□ 0.31
TDP2-202ENST00000378198 ZNF776Q68DI1 518 aaPredicted RBP16.97■□□□□ 0.31
TDP2-202ENST00000378198 CNIH2Q6PI25 160 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 AMIGO1Q86WK6 493 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 C19orf18Q8NEA5 215 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 NEIL3Q8TAT5 605 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 NT5CQ8TCD5 201 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 SECISBP2Q96T21 854 aaKnown RBP16.97■□□□□ 0.31
TDP2-202ENST00000378198 C1QTNF7Q9BXJ2 289 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 HDHD5Q9BXW7 423 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 C6orf106Q9H6K1 298 aaPredicted RBP16.97■□□□□ 0.31
TDP2-202ENST00000378198 SFXN1Q9H9B4 322 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 TNFRSF10DQ9UBN6 386 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 PHF11Q9UIL8 331 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 SLC7A7Q9UM01 511 aa16.97■□□□□ 0.31
TDP2-202ENST00000378198 WDR45Q9Y484 360 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms