RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 AP1ARQ63HQ0 302 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 BICRALQ6AI39 1079 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 HEPHL1Q6MZM0 1159 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 FIGNL1Q6PIW4 674 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 ANGPTL8Q6UXH0 198 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 RNF130Q86XS8 419 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 FAM109AQ8N4B1 249 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 DPP10Q8N608 796 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 OR5D16Q8NGK9 328 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 OTUB1Q96FW1 271 aaPredicted RBP12.12□□□□□ -0.47
CKAP2-202ENST00000378034 GPR137Q96N19 417 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 FAM107BQ9H098 131 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 POLE3Q9NRF9 147 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 UBQLN4Q9NRR5 601 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 SLC6A13Q9NSD5 602 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 THUMPD1Q9NXG2 353 aaKnown RBP12.12□□□□□ -0.47
CKAP2-202ENST00000378034 LIPT1Q9Y234 373 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 PCDHB14Q9Y5E9 798 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 WIF1Q9Y5W5 379 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 CBX6O95503 412 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 OR12D1P0DN82 309 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 HOXB9P17482 250 aaPredicted RBP12.11□□□□□ -0.47
CKAP2-202ENST00000378034 TBXA2RP21731 343 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 COQ5Q5HYK3 327 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 PAGE3Q5JUK9 113 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 TIGD3Q6B0B8 471 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 DNAJC14Q6Y2X3 702 aaPredicted RBP12.11□□□□□ -0.47
CKAP2-202ENST00000378034 C16orf62Q7Z3J2 963 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 OR1J4Q8NGS1 313 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 XAGE5Q8WWM1 108 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 OIT3Q8WWZ8 545 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 SDF2Q99470 211 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 ZDHHC11Q9H8X9 412 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 SEC14L3Q9UDX4 400 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 KCNE3Q9Y6H6 103 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 CAPN7Q9Y6W3 813 aa12.11□□□□□ -0.47
CKAP2-202ENST00000378034 LRRC3CA6NJW4 275 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 BBIP1A8MTZ0 92 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 NPIPA5E9PKD4 350 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 J3QKU1 62 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 HMGN4O00479 90 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 SNPHO15079 494 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 STX11O75558 287 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 RFC3P40938 356 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 GAS1P54826 345 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 UBAP2LQ14157 1087 aaKnown RBP12.1□□□□□ -0.47
CKAP2-202ENST00000378034 ELOAQ14241 798 aaKnown RBP12.1□□□□□ -0.47
CKAP2-202ENST00000378034 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 GRAMD1BQ3KR37 738 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 CCNJQ5T5M9 372 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 TNFAIP8L2Q6P589 184 aaPredicted RBP12.1□□□□□ -0.47
CKAP2-202ENST00000378034 TMEM251Q8N6I4 163 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 ZNF527Q8NB42 609 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 OR52N2Q8NGI0 321 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 JSRP1Q96MG2 331 aaPredicted RBP12.1□□□□□ -0.47
CKAP2-202ENST00000378034 TBL1XR1Q9BZK7 514 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 NMUR2Q9GZQ4 415 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 NPIPA1Q9UND3 350 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 CORO2BQ9UQ03 480 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 NINQ8N4C6 2090 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 TRBV5-3A0A0A0MS03 114 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 A0A1W2PQD3 144 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 FAM166BA8MTA8 275 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 ALG1L2C9J202 215 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 CLIC1O00299 241 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 CBR3O75828 277 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 HPGDP15428 266 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 MVDP53602 400 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 FADDQ13158 208 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 CMPK2Q5EBM0 449 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 FNDC7Q5VTL7 733 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 PIGWQ7Z7B1 504 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 MISPQ8IVT2 679 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 GHDCQ8N2G8 530 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 OR4C3Q8NH37 302 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 PMM1Q92871 262 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 ZNF703Q9H7S9 590 aaPredicted RBP12.1□□□□□ -0.47
CKAP2-202ENST00000378034 GALNT9Q9HCQ5 603 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 FBXO34Q9NWN3 711 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 C15orf41Q9Y2V0 281 aa12.1□□□□□ -0.47
CKAP2-202ENST00000378034 PRRC2CQ9Y520 2896 aaKnown RBP12.1□□□□□ -0.47
CKAP2-202ENST00000378034 ANKUB1A6NFN9 424 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 SCDO00767 359 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 OXSR1O95747 527 aaPredicted RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 NPPAP01160 153 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 IGHG3P01860 377 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 CD1EP15812 388 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 ENDOUP21128 410 aaKnown RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 ATP12AP54707 1039 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 CASP9P55211 416 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 RBPJQ06330 500 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 C17orf67Q0P5P2 114 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 STX5Q13190 355 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 SLC10A1Q14973 349 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 GTDC1Q4AE62 458 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 FLYWCH1Q4VC44 716 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 GFRALQ6UXV0 394 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 DLEU7Q6UYE1 221 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 PLCZ1Q86YW0 608 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 RAB8BQ92930 207 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms