RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 RPL6Q02878 288 aaKnown RBP12.98□□□□□ -0.33
SF1-205ENST00000377394 CRYZQ08257 329 aaKnown RBP12.98□□□□□ -0.33
SF1-205ENST00000377394 ZNF273Q14593 569 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 HNRNPA1L2Q32P51 320 aaKnown RBP12.98□□□□□ -0.33
SF1-205ENST00000377394 TMEM52BQ4KMG9 183 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 WASH2PQ6VEQ5 465 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 USP30Q70CQ3 517 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 ERN2Q76MJ5 926 aaKnown RBP12.98□□□□□ -0.33
SF1-205ENST00000377394 ADGRD2Q7Z7M1 963 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 MORN4Q8NDC4 146 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 OR4K5Q8NGD3 323 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 XAGE5Q8WWM1 108 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 TM9SF4Q92544 642 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 RGMAQ96B86 450 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 SOSTQ9BQB4 213 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 KCNK12Q9HB15 430 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 TAS2R7Q9NYW3 318 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 UBQLN2Q9UHD9 624 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 PCDHGB7Q9Y5F8 929 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 SPIN1Q9Y657 262 aaPredicted RBP12.98□□□□□ -0.33
SF1-205ENST00000377394 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 PPM1DO15297 605 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 LCMT2O60294 686 aaKnown RBP12.98□□□□□ -0.33
SF1-205ENST00000377394 EPHX1P07099 455 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 CPEP16870 476 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 CEBPBP17676 345 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 CDK5Q00535 292 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 C1DQ13901 141 aaKnown RBP12.98□□□□□ -0.33
SF1-205ENST00000377394 GPR176Q14439 515 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 C1orf53Q5VUE5 145 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 ZFP41Q8N8Y5 198 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 OR6T1Q8NGN1 323 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 OR8D1Q8WZ84 308 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 WBP1Q96G27 269 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 SLC35G5Q96KT7 338 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 LRR1Q96L50 414 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 AMDHD1Q96NU7 426 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 KCNJ15Q99712 375 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 AICDAQ9GZX7 198 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 NT5DC2Q9H857 520 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 DDX31Q9H8H2 851 aaKnown RBP12.98□□□□□ -0.33
SF1-205ENST00000377394 KCNMB2Q9Y691 235 aa12.98□□□□□ -0.33
SF1-205ENST00000377394 LINC01387J3KSC0 135 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 RAB36O95755 333 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 CLTBP09497 229 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 NR2F1P10589 423 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 CCL5P13501 91 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 SLC6A11P48066 632 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 SF3A2Q15428 464 aaKnown RBP12.97□□□□□ -0.33
SF1-205ENST00000377394 COL28A1Q2UY09 1125 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 FNDC3BQ53EP0 1204 aaKnown RBP12.97□□□□□ -0.33
SF1-205ENST00000377394 CRTC2Q53ET0 693 aaPredicted RBP12.97□□□□□ -0.33
SF1-205ENST00000377394 ATAT1Q5SQI0 421 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 C1orf94Q6P1W5 598 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 TMEM107Q6UX40 140 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 B3GLCTQ6Y288 498 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 HMGN2P46Q86SG4 172 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 IQCHQ86VS3 1027 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 MS4A15Q8N5U1 240 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 KCTD7Q96MP8 289 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 FNDC11Q9BVV2 318 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 RBCK1Q9BYM8 510 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 ZSCAN32Q9NX65 697 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 ADAM29Q9UKF5 820 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 FBXW2Q9UKT8 454 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 LOC105369274A0A096LPK9 316 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 A0A0A6YYD5 115 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 A0A0G2JN53 185 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 RFXAPO00287 272 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 KHNYNO15037 678 aaKnown RBP12.97□□□□□ -0.33
SF1-205ENST00000377394 TOXO94900 526 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 IFNA7P01567 189 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 CBX5P45973 191 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 PUDPQ08623 228 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 FUT5Q11128 374 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 IKZF1Q13422 519 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 NDUFA9Q16795 377 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 ENTPD8Q5MY95 495 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 OR2G6Q5TZ20 316 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 RTL4Q6ZR62 310 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 GRASPQ7Z6J2 395 aaPredicted RBP12.97□□□□□ -0.33
SF1-205ENST00000377394 ETFBKMTQ8IXQ9 262 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 OR4N4Q8N0Y3 316 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 C7orf57Q8NEG2 295 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 RSPRY1Q96DX4 576 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 OTUB1Q96FW1 271 aaPredicted RBP12.97□□□□□ -0.33
SF1-205ENST00000377394 DPH7Q9BTV6 452 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 PLA2G12AQ9BZM1 189 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 HDHD2Q9H0R4 259 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 CLEC4MQ9H2X3 399 aaPredicted RBP12.97□□□□□ -0.33
SF1-205ENST00000377394 SCPEP1Q9HB40 452 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 IFT46Q9NQC8 304 aa12.97□□□□□ -0.33
SF1-205ENST00000377394 EDDM13A0A1B0GTR0 161 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 A0A1B0GVC2 190 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 A0A1W2PPL8 197 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 A6NIN4 97 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 OR1F1O43749 312 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 CHRM4P08173 479 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 VSX2P58304 361 aaPredicted RBP12.96□□□□□ -0.33
SF1-205ENST00000377394 ELAVL3Q14576 367 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms