RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 KRTCAP2Q8N6L1 136 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 ERMAPQ96PL5 475 aaPredicted RBP14.6□□□□□ -0.07
FXN-201ENST00000377270 MGLLQ99685 303 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 GABARAPL3Q9BY60 117 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 MIXL1Q9H2W2 232 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 SLC32A1Q9H598 525 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 SLC28A3Q9HAS3 691 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 ABCB9Q9NP78 766 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 KLHL1Q9NR64 748 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 MED11Q9P086 117 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 CA5BQ9Y2D0 317 aa14.6□□□□□ -0.07
FXN-201ENST00000377270 PRRC2BQ5JSZ5 2229 aaKnown RBP14.6□□□□□ -0.07
FXN-201ENST00000377270 ZNF106Q9H2Y7 1883 aaKnown RBP14.59□□□□□ -0.07
FXN-201ENST00000377270 A8MVJ9 347 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 RRP8O43159 456 aaKnown RBP14.59□□□□□ -0.07
FXN-201ENST00000377270 FABP3P05413 133 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 ADH1AP07327 375 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 HOXC4P09017 264 aaPredicted RBP14.59□□□□□ -0.07
FXN-201ENST00000377270 GGT2P36268 569 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 SPINT3P49223 89 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 UBE2IP63279 158 aaKnown RBP14.59□□□□□ -0.07
FXN-201ENST00000377270 POU4F2Q12837 409 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 SPANXN4Q5MJ08 99 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 C1orf53Q5VUE5 145 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 TRIQKQ629K1 86 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 Q6ZPB1 254 aaPredicted RBP14.59□□□□□ -0.07
FXN-201ENST00000377270 TCEAL4Q96EI5 215 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 DIRAS2Q96HU8 199 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 SOX30O94993 753 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 RAB3DO95716 219 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 EPORP19235 508 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 RAB4AP20338 218 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 AOAHP28039 575 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 BOP1Q14137 746 aaKnown RBP14.59□□□□□ -0.07
FXN-201ENST00000377270 MED22Q15528 200 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 SAPCD1Q5SSQ6 148 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 LDLRAD3Q86YD5 345 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 C10orf111Q8N326 155 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 FTMTQ8N4E7 242 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 C9orf43Q8TAL5 461 aaPredicted RBP14.59□□□□□ -0.07
FXN-201ENST00000377270 MISP3Q96FF7 219 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 TGIF2Q9GZN2 237 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 WASF3Q9UPY6 502 aa14.59□□□□□ -0.07
FXN-201ENST00000377270 MTX2O75431 263 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 PDYNP01213 254 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 HIST1H2AGP0C0S8 130 aaPredicted RBP14.58□□□□□ -0.08
FXN-201ENST00000377270 ENGP17813 658 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 HIST1H2ADP20671 130 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 RGS19P49795 217 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 ZXDCQ2QGD7 858 aaPredicted RBP14.58□□□□□ -0.08
FXN-201ENST00000377270 MINDY4Q4G0A6 757 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 ALKAL2Q6UX46 152 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 GDPD4Q6W3E5 623 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 ZNF605Q86T29 641 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 ANKRD46Q86W74 232 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 VRK3Q8IV63 474 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 HGDQ93099 445 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 HIST1H2AHQ96KK5 128 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 KCNC2Q96PR1 638 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 TEFMQ96QE5 360 aaKnown RBP14.58□□□□□ -0.08
FXN-201ENST00000377270 HIST1H2AJQ99878 128 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 REEP1Q9H902 201 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 EXOSC4Q9NPD3 245 aaKnown RBP14.58□□□□□ -0.08
FXN-201ENST00000377270 ZNF451Q9Y4E5 1061 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 IGLV3-16A0A075B6K0 115 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 TRBV5-3A0A0A0MS03 114 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 ADRB3P13945 408 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 RBP2P50120 134 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 SKP2Q13309 424 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 DOC2AQ14183 400 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 UAP1L1Q3KQV9 507 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 HIST2H2AA3Q6FI13 130 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 OR4F3Q6IEY1 312 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 TCEAL6Q6IPX3 200 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 RNF165Q6ZSG1 346 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 MEIOBQ8N635 442 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 MOSPD2Q8NHP6 518 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 STK35Q8TDR2 534 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 SELENOMQ8WWX9 145 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 SCAMP4Q969E2 229 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 ARMC5Q96C12 935 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 FBXO17Q96EF6 278 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 C2orf88Q9BSF0 95 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 SLC12A9Q9BXP2 914 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 MRPL37Q9BZE1 423 aaKnown RBP14.58□□□□□ -0.08
FXN-201ENST00000377270 ACPTQ9BZG2 426 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 LINC00597Q9H2U6 94 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 OPA3Q9H6K4 179 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 RAD18Q9NS91 495 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 SNTG1Q9NSN8 517 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 TAS2R16Q9NYV7 291 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 PPP4R1LQ9P1A2 415 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 MRTO4Q9UKD2 239 aaKnown RBP14.58□□□□□ -0.08
FXN-201ENST00000377270 STUB1Q9UNE7 303 aa14.58□□□□□ -0.08
FXN-201ENST00000377270 IQCMA0A1B0GVH7 501 aa14.57□□□□□ -0.08
FXN-201ENST00000377270 ACOD1A6NK06 481 aa14.57□□□□□ -0.08
FXN-201ENST00000377270 OIP5O43482 229 aa14.57□□□□□ -0.08
FXN-201ENST00000377270 ICOSLGO75144 302 aa14.57□□□□□ -0.08
FXN-201ENST00000377270 TOXO94900 526 aa14.57□□□□□ -0.08
FXN-201ENST00000377270 TIMP1P01033 207 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms