RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 FRS3O43559 492 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 NPR2P20594 1047 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 FPR3P25089 353 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 NCBP2P52298 156 aaKnown RBP eCLIP19.79■□□□□ 0.764e-7■■■■□ 22.1
UPF3A-202ENST00000375299 ST3GAL3Q11203 375 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 PIP5KL1Q5T9C9 394 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 PARS2Q7L3T8 475 aaKnown RBP19.79■□□□□ 0.76
UPF3A-202ENST00000375299 KRT74Q7RTS7 529 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 LSMEM1Q8N8F7 131 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 LINC00615Q96LM1 132 aaPredicted RBP19.79■□□□□ 0.76
UPF3A-202ENST00000375299 COQ10AQ96MF6 247 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 FCRL4Q96PJ5 515 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 SORCS2Q96PQ0 1159 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 IL20Q9NYY1 176 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 H2AFY2Q9P0M6 372 aaPredicted RBP19.79■□□□□ 0.76
UPF3A-202ENST00000375299 PRELID1Q9Y255 219 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 SIRT4Q9Y6E7 314 aaPredicted RBP19.79■□□□□ 0.76
UPF3A-202ENST00000375299 C17orf113A0A1B0GUU1 675 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 J3QRE1 110 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 SYT5O00445 386 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 SCO1O75880 301 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 SRP9P49458 86 aaKnown RBP19.78■□□□□ 0.76
UPF3A-202ENST00000375299 REEP5Q00765 189 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 LASP1Q14847 261 aaKnown RBP19.78■□□□□ 0.76
UPF3A-202ENST00000375299 ZNF311Q5JNZ3 666 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 PYHIN1Q6K0P9 492 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 KLK6Q92876 244 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 WASH6PQ9NQA3 447 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 ADAM29Q9UKF5 820 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 GPR55Q9Y2T6 319 aaPredicted RBP19.78■□□□□ 0.76
UPF3A-202ENST00000375299 CSNK1G3Q9Y6M4 447 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 RNF215Q9Y6U7 377 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 TEX13CA0A0J9YWL9 993 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 A0A1B0GVC2 190 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 A6NIN4 97 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 SLC2A10O95528 541 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 TCRBP04435 133 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 TYRP14679 529 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 SHC1P29353 583 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 SHC2P98077 582 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 ZNF697Q5TEC3 545 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 UBE3DQ7Z6J8 389 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 OR51G2Q8NGK0 314 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 OR2L2Q8NH16 312 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 NRTNQ99748 197 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 DPH7Q9BTV6 452 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 ANKRD19PQ9H560 264 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 HINT3Q9NQE9 182 aaKnown RBP19.78■□□□□ 0.76
UPF3A-202ENST00000375299 SLC35C2Q9NQQ7 365 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 CREBZFQ9NS37 354 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 SLC13A4Q9UKG4 626 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 RASD1Q9Y272 281 aa19.78■□□□□ 0.76
UPF3A-202ENST00000375299 A0A0G2JN53 185 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 KIAA0355O15063 1070 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 OR7A10O76100 309 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 CXCL3P19876 107 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 ENPP1P22413 925 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 PTGER1P34995 402 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 GPR4P46093 362 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 POU4F3Q15319 338 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 SLC36A2Q495M3 483 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 TMEM64Q6YI46 380 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 ABHD1Q96SE0 405 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 OR52A5Q9H2C5 316 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 BABAM2Q9NXR7 383 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 MAFFQ9ULX9 164 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 STON1Q9Y6Q2 735 aa19.77■□□□□ 0.76
UPF3A-202ENST00000375299 SOX30O94993 753 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 HMGN2P05204 90 aaKnown RBP19.77■□□□□ 0.75
UPF3A-202ENST00000375299 NTSP30990 170 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 CCR8P51685 355 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 TAS2R38P59533 333 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 KLHL12Q53G59 568 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 NDUFAF5Q5TEU4 345 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 GPR139Q6DWJ6 353 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 SFXN4Q6P4A7 337 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 ZNF620Q6ZNG0 422 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 NKAIN4Q8IVV8 208 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 DCUN1D3Q8IWE4 304 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 ACOT11Q8WXI4 607 aaPredicted RBP19.77■□□□□ 0.75
UPF3A-202ENST00000375299 HGDQ93099 445 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 ART5Q96L15 291 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 ERVMER34-1Q9H9K5 563 aa19.77■□□□□ 0.75
UPF3A-202ENST00000375299 RPS10-NUDT3A0A1W2PQS6 291 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 PAPLNO95428 1278 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 DRD2P14416 443 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 TRHRP34981 398 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-202ENST00000375299 GPR1P46091 355 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 TRA2BP62995 288 aaKnown RBP19.76■□□□□ 0.75
UPF3A-202ENST00000375299 PRAMEF8Q5VWM4 474 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 PRAMEF7Q5VXH5 474 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 LYPD4Q6UWN0 246 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 WASH2PQ6VEQ5 465 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 CXXC5Q7LFL8 322 aaKnown RBP19.76■□□□□ 0.75
UPF3A-202ENST00000375299 COMMD7Q86VX2 200 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 VRK2Q86Y07 508 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 SFXN5Q8TD22 340 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 BBS4Q96RK4 519 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 ALG8Q9BVK2 526 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 C12orf10Q9HB07 376 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms